RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CSO75390 466 aaKnown RBP11.72□□□□□ -0.53
VPS33B-201ENST00000333371 PCSK2P16519 638 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 SOX6P35712 828 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 RBBP4Q09028 425 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 HSPB3Q12988 150 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 TAB1Q15750 504 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF630Q2M218 657 aaPredicted RBP11.72□□□□□ -0.53
VPS33B-201ENST00000333371 CCDC80Q76M96 950 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 COMTD1Q86VU5 262 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 LAS2Q8IYD9 372 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 ST13P5Q8NFI4 369 aaPredicted RBP11.72□□□□□ -0.53
VPS33B-201ENST00000333371 IRF7Q92985 503 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 CRELD1Q96HD1 420 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 TAPBPLQ9BX59 468 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 NEK6Q9HC98 313 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 CTPS2Q9NRF8 586 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 REV1Q9UBZ9 1251 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 A3GALT2U3KPV4 340 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 SNRNP200O75643 2136 aaKnown RBP11.72□□□□□ -0.53
VPS33B-201ENST00000333371 A0A0G2JN53 185 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 EFCAB10A6NFE3 127 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 WASHC1A8K0Z3 465 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 KPNA3O00505 521 aaPredicted RBP11.72□□□□□ -0.53
VPS33B-201ENST00000333371 OR10H3O60404 316 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 HBQ1P09105 142 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 RHCEP18577 417 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 SLC15A1P46059 708 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 HMGA2P52926 109 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 DCDC1P59894 354 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 OLR1P78380 273 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 MESP2Q0VG99 397 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 NFE2L1Q14494 772 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 BAK1Q16611 211 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 CCDC92Q53HC0 331 aaPredicted RBP11.72□□□□□ -0.53
VPS33B-201ENST00000333371 C19orf48Q6RUI8 117 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 WASH2PQ6VEQ5 465 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 ADGRF3Q8IZF5 1079 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 TMEM203Q969S6 136 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 ARMC5Q96C12 935 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 TMEM19Q96HH6 336 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 METTL2AQ96IZ6 378 aaKnown RBP11.72□□□□□ -0.53
VPS33B-201ENST00000333371 MRGPRX3Q96LB0 322 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 SLC30A2Q9BRI3 323 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 SMURF1Q9HCE7 757 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 ANGPT4Q9Y264 503 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 IRAK3Q9Y616 596 aa11.72□□□□□ -0.53
VPS33B-201ENST00000333371 TBX6O95947 436 aaPredicted RBP11.71□□□□□ -0.53
VPS33B-201ENST00000333371 SYN1P17600 705 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 TNNI3P19429 210 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 CNTN1Q12860 1018 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 C1QTNF12Q5T7M4 302 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 PARS2Q7L3T8 475 aaKnown RBP11.71□□□□□ -0.53
VPS33B-201ENST00000333371 SZRD1Q7Z422 152 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 C11orf74Q86VG3 221 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 TCEANCQ8N8B7 351 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF557Q8N988 423 aaPredicted RBP11.71□□□□□ -0.53
VPS33B-201ENST00000333371 FAM46DQ8NEK8 389 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 SLC5A11Q8WWX8 675 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 BADQ92934 168 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 ZNF486Q96H40 463 aaPredicted RBP11.71□□□□□ -0.53
VPS33B-201ENST00000333371 DMRTB1Q96MA1 342 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 OR2A14Q96R47 310 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 MAPKAP1Q9BPZ7 522 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 MYNNQ9NPC7 610 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 TIGARQ9NQ88 270 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 SPHK2Q9NRA0 654 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 WBP1LQ9NX94 342 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 KLHL3Q9UH77 587 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 REV3LO60673 3130 aa11.71□□□□□ -0.53
VPS33B-201ENST00000333371 NUP210Q8TEM1 1887 aaPredicted RBP11.71□□□□□ -0.53
VPS33B-201ENST00000333371 SCN2AQ99250 2005 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 CXorf51AA0A1B0GTR3 108 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 WASH3PC4AMC7 463 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 TFECO14948 347 aaPredicted RBP11.71□□□□□ -0.54
VPS33B-201ENST00000333371 SOD1P00441 154 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 CLEC2LP0C7M8 214 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 OR2B6P58173 313 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF697Q5TEC3 545 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 LIPKQ5VXJ0 399 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 TCTN3Q6NUS6 607 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 NXPE4Q6UWF7 544 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 TMIGD1Q6UXZ0 262 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 APOBEC4Q8WW27 367 aaKnown RBP11.71□□□□□ -0.54
VPS33B-201ENST00000333371 ASB15Q8WXK1 588 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 CXorf40BQ96DE9 158 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 TRNT1Q96Q11 434 aaKnown RBP11.71□□□□□ -0.54
VPS33B-201ENST00000333371 F2RL3Q96RI0 385 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 MVB12BQ9H7P6 319 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 SLC25A19Q9HC21 320 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 TBC1D14Q9P2M4 693 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 IL36AQ9UHA7 158 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 CFL2Q9Y281 166 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 YARS2Q9Y2Z4 477 aaKnown RBP11.71□□□□□ -0.54
VPS33B-201ENST00000333371 BOLA1Q9Y3E2 137 aa11.71□□□□□ -0.54
VPS33B-201ENST00000333371 SH3BP5O60239 455 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 STATHP02808 62 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 POLR2EP19388 210 aaKnown RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 PTX3P26022 381 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 ELAVL4P26378 380 aaKnown RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 IRS1P35568 1242 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms