RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 SUN3Q8TAQ9 357 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 VMP1Q96GC9 406 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 DGAT2Q96PD7 388 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 PELOQ9BRX2 385 aaKnown RBP13.09□□□□□ -0.31
LIMS1-201ENST00000332345 MECRQ9BV79 373 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 ACPTQ9BZG2 426 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 SHCBP1LQ9BZQ2 653 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 RNF32Q9H0A6 362 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 EPN3Q9H201 632 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 KCNK9Q9NPC2 374 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 PSME2Q9UL46 239 aa13.09□□□□□ -0.31
LIMS1-201ENST00000332345 PPIEQ9UNP9 301 aaKnown RBP13.09□□□□□ -0.31
LIMS1-201ENST00000332345 MYOCOSA0A1B0GUC4 107 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 GLOD5A6NK44 160 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 C17orf105B2RV13 164 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 J3QKU1 62 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 AZIN1O14977 448 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 PGRMC2O15173 223 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 FGF17O60258 216 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 AIFM1O95831 613 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 WDPCPO95876 746 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 CHEK2O96017 543 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 BPGMP07738 259 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 CHN1P15882 459 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 PIK3R1P27986 724 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 SERPINB3P29508 390 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 ETV4P43268 484 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 STT3AP46977 705 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 HTR6P50406 440 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 FOXA1P55317 472 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.32
LIMS1-201ENST00000332345 ID2Q02363 134 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 BTKQ06187 659 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
LIMS1-201ENST00000332345 NDUFAF5Q5TEU4 345 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 OR52E8Q6IFG1 317 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 SCIMPQ6UWF3 145 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 TRIM46Q7Z4K8 759 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 CUZD1Q86UP6 607 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 CRLF3Q8IUI8 442 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 LGI4Q8N135 537 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 AMER2Q8N7J2 671 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 APCDD1LQ8NCL9 501 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 OR4K14Q8NGD5 310 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 PPP1R14CQ8TAE6 165 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 PTPMT1Q8WUK0 201 aaPredicted RBP13.08□□□□□ -0.32
LIMS1-201ENST00000332345 FAIM2Q9BWQ8 316 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.08□□□□□ -0.32
LIMS1-201ENST00000332345 CDCP1Q9H5V8 836 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 RRAGDQ9NQL2 400 aaPredicted RBP13.08□□□□□ -0.32
LIMS1-201ENST00000332345 PLA2G3Q9NZ20 509 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 MCM8Q9UJA3 840 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 CPAMD8Q8IZJ3 1885 aa13.08□□□□□ -0.32
LIMS1-201ENST00000332345 TRAV17A0A0B4J275 112 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 TRBV11-1A0A0K0K1C0 115 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 C1orf226A1L170 272 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 SLC28A1O00337 649 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 BIRC5O15392 142 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 OR10H2O60403 315 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 ZFAND5O76080 213 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 SORBS2O94875 1100 aaKnown RBP13.07□□□□□ -0.32
LIMS1-201ENST00000332345 ZWINTO95229 277 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 FGF4P08620 206 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 ALOX15P16050 662 aaPredicted RBP13.07□□□□□ -0.32
LIMS1-201ENST00000332345 TNFSF10P50591 281 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 GPR143P51810 404 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 MLLT10P55197 1068 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 PLIN5Q00G26 463 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 HMGCS1Q01581 520 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 ARL13AQ5H913 290 aaPredicted RBP13.07□□□□□ -0.32
LIMS1-201ENST00000332345 FCRLBQ6BAA4 426 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 HSDL2Q6YN16 418 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 ST13P4Q8IZP2 240 aaPredicted RBP13.07□□□□□ -0.32
LIMS1-201ENST00000332345 CLYBLQ8N0X4 340 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 KIF2BQ8N4N8 673 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 HORMAD2Q8N7B1 307 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 Q8NA96 180 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 CATSPER1Q8NEC5 780 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 OR1N1Q8NGS0 311 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 CPT1CQ8TCG5 803 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 NCLNQ969V3 563 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 ZBTB9Q96C00 473 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 TM4SF18Q96CE8 201 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 METTL2AQ96IZ6 378 aaKnown RBP13.07□□□□□ -0.32
LIMS1-201ENST00000332345 UTP23Q9BRU9 249 aaKnown RBP13.07□□□□□ -0.32
LIMS1-201ENST00000332345 OR8D2Q9GZM6 311 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 SIRT5Q9NXA8 310 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 COPS7AQ9UBW8 275 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 TRAF6Q9Y4K3 522 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 PCDHA9Q9Y5H5 950 aa13.07□□□□□ -0.32
LIMS1-201ENST00000332345 GNG14A0A1W2PPG7 69 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 OR5H15A6NDH6 313 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 WASHC1A8K0Z3 465 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 FCHO1O14526 889 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 RGS14O43566 566 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 PCDH7O60245 1069 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 PRKRAO75569 313 aaKnown RBP13.06□□□□□ -0.32
LIMS1-201ENST00000332345 SLC35E2P0CK97 266 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 NEFHP12036 1026 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 GALNSP34059 522 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms