RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 DEPPQ9NTK1 212 aa12.59□□□□□ -0.39
GTF3C6-201ENST00000329970 NINJ2Q9NZG7 142 aa12.59□□□□□ -0.39
GTF3C6-201ENST00000329970 COPS7AQ9UBW8 275 aa12.59□□□□□ -0.39
GTF3C6-201ENST00000329970 MTRF1LQ9UGC7 380 aaKnown RBP12.59□□□□□ -0.39
GTF3C6-201ENST00000329970 TMCO1Q9UM00 188 aa12.59□□□□□ -0.39
GTF3C6-201ENST00000329970 ANGPTL3Q9Y5C1 460 aa12.59□□□□□ -0.39
GTF3C6-201ENST00000329970 FREM3P0C091 2139 aa12.59□□□□□ -0.39
GTF3C6-201ENST00000329970 INTS1Q8N201 2190 aaKnown RBP12.59□□□□□ -0.39
GTF3C6-201ENST00000329970 A0A1B0GTH9 108 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 DYRK3O43781 588 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 HS6ST1O60243 411 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 FGF17O60258 216 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 OR6B1O95007 311 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 ETHE1O95571 254 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 TNNI3P19429 210 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 CNR1P21554 472 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 TYK2P29597 1187 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 TLX1P31314 330 aaPredicted RBP12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 FBN2P35556 2912 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 BUD31P41223 144 aaPredicted RBP12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 PLIN5Q00G26 463 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 TBL3Q12788 808 aaKnown RBP12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 SLAMF1Q13291 335 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 PFKFB4Q16877 469 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 HYAL4Q2M3T9 481 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 SPRED3Q2MJR0 410 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 NDUFAF5Q5TEU4 345 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 PAOXQ6QHF9 649 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 IL20RBQ6UXL0 311 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 GK5Q6ZS86 529 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 GDF7Q7Z4P5 450 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 GPR180Q86V85 440 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 MCEMP1Q8IX19 187 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 DND1Q8IYX4 353 aaKnown RBP12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 ST13P4Q8IZP2 240 aaPredicted RBP12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 MMGT1Q8N4V1 131 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 SLC15A4Q8N697 577 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 ZNF321PQ8N8H1 164 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 ACBD4Q8NC06 268 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 OR2M7Q8NG81 312 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 SLC44A1Q8WWI5 657 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 MTFMTQ96DP5 389 aaKnown RBP12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 DGAT2Q96PD7 388 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 NTMT1Q9BV86 223 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 ACTR8Q9H981 624 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 LYARQ9NX58 379 aaKnown RBP12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 DCHS2Q6V1P9 2916 aa12.58□□□□□ -0.4
GTF3C6-201ENST00000329970 NCKAP5O14513 1909 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 CSMD2Q7Z408 3487 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 A0A0A6YYD5 115 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 STX16-NPEPL1H3BU86 382 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 ACOT7O00154 380 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 WWP2O00308 870 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 STX16O14662 325 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 PROM1O43490 865 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 GLSO94925 669 aaPredicted RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 SEMA3DO95025 777 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 IGHG3P01860 377 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 RBP1P09455 135 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 COL6A2P12110 1019 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 COX6B1P14854 86 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 CNTFP26441 200 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 BSGP35613 385 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 SERPINB9P50453 376 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 HNRNPH2P55795 449 aaKnown RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 GPR85P60893 370 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 RPS13P62277 151 aaKnown RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 FOLH1Q04609 750 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 TSNAXIP1Q2TAA8 658 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 PIGGQ5H8A4 983 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 C16orf47Q6ZP98 133 aaPredicted RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 GOLGA7Q7Z5G4 137 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 SLC22A16Q86VW1 577 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 OR52N2Q8NGI0 321 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 RBM18Q96H35 190 aaKnown RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 FBXL20Q96IG2 436 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 SCYL1Q96KG9 808 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 MTERF1Q99551 399 aaKnown RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 FAM173AQ9BQD7 235 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 TP63Q9H3D4 680 aaPredicted RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 CDC42EP4Q9H3Q1 356 aaKnown RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 IPPKQ9H8X2 491 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 LIN28AQ9H9Z2 209 aaKnown RBP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 SH2D2AQ9NP31 389 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 ZNF180Q9UJW8 692 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 ATG4BQ9Y4P1 393 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 ASB4Q9Y574 426 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 PDZD2O15018 2839 aa12.57□□□□□ -0.4
GTF3C6-201ENST00000329970 A0A1B0GVC2 190 aa12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 PINLYPA6NC86 204 aa12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 OR14I1A6ND48 311 aa12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 SAP18O00422 153 aaKnown RBP12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 CLDN9O95484 217 aa12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 ALOX15P16050 662 aaPredicted RBP12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 RFC3P40938 356 aa12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 DDX39BQ13838 428 aaKnown RBP12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 CDSNQ15517 529 aa12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 CPSF6Q16630 551 aaKnown RBP eCLIP12.56□□□□□ -0.4
GTF3C6-201ENST00000329970 ZNF791Q3KP31 576 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms