RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 FOXA1P55317 472 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 IGLV3-21P80748 117 aaPredicted RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 ID2Q02363 134 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 GALNT1Q10472 559 aaPredicted RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 TBL3Q12788 808 aaKnown RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 COLEC12Q5KU26 742 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 BEND6Q5SZJ8 279 aaPredicted RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 NDUFAF5Q5TEU4 345 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 C6orf163Q5TEZ5 329 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 H3F3CQ6NXT2 135 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 CUZD1Q86UP6 607 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 CRLF3Q8IUI8 442 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 ST13P4Q8IZP2 240 aaPredicted RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 Q8NA96 180 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 MORN4Q8NDC4 146 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 PPP1R14CQ8TAE6 165 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 SUN3Q8TAQ9 357 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 NCLNQ969V3 563 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 MECRQ9BV79 373 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 GATA5Q9BWX5 397 aaPredicted RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 RRAGDQ9NQL2 400 aaPredicted RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 ARGLU1Q9NWB6 273 aaPredicted RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 MCM8Q9UJA3 840 aa13.85□□□□□ -0.19
CLRN1-203ENST00000328863 PPIEQ9UNP9 301 aaKnown RBP13.85□□□□□ -0.19
CLRN1-203ENST00000328863 TRAV17A0A0B4J275 112 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 GNG14A0A1W2PPG7 69 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 A0A1W2PR48 441 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 C1orf226A1L170 272 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 SERTM1A2A2V5 107 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 C17orf105B2RV13 164 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 CDK2AP1O14519 115 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 AZIN1O14977 448 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 OR10H2O60403 315 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 RSL1D1O76021 490 aaKnown RBP13.84□□□□□ -0.19
CLRN1-203ENST00000328863 ZWINTO95229 277 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 ALOX15P16050 662 aaPredicted RBP13.84□□□□□ -0.19
CLRN1-203ENST00000328863 CREB1P16220 341 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 TIA1P31483 386 aaKnown RBP eCLIP13.84□□□□□ -0.19
CLRN1-203ENST00000328863 GSTM5P46439 218 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 TRA2BP62995 288 aaKnown RBP13.84□□□□□ -0.19
CLRN1-203ENST00000328863 HMGCS1Q01581 520 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 INAQ16352 499 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 ACER2Q5QJU3 275 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 EXOC3L1Q86VI1 746 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 BEST3Q8N1M1 668 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 KIF2BQ8N4N8 673 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 APCDD1LQ8NCL9 501 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 NFAM1Q8NET5 270 aaPredicted RBP13.84□□□□□ -0.19
CLRN1-203ENST00000328863 DNAJB14Q8TBM8 379 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 CPT1CQ8TCG5 803 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 ANKRD9Q96BM1 317 aaPredicted RBP13.84□□□□□ -0.19
CLRN1-203ENST00000328863 DEFB126Q9BYW3 111 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 SHCBP1LQ9BZQ2 653 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.84□□□□□ -0.19
CLRN1-203ENST00000328863 MAP10Q9P2G4 905 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 PCDHGA10Q9Y5H3 936 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 CSAG2Q9Y5P2 127 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 CNTRLQ7Z7A1 2325 aa13.84□□□□□ -0.19
CLRN1-203ENST00000328863 GABRR3A8MPY1 467 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 GPR75O95800 540 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 WDPCPO95876 746 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 BPGMP07738 259 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 PIK3R1P27986 724 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 ETV4P43268 484 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 SERPINB4P48594 390 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 TNFSF10P50591 281 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 MLLT10P55197 1068 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 SPRED3Q2MJR0 410 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 TNFAIP8L3Q5GJ75 292 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 SPDYAQ5MJ70 313 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 FAM219BQ5XKK7 198 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 FCRLBQ6BAA4 426 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 CLEC6AQ6EIG7 209 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 RNF165Q6ZSG1 346 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 ZCCHC23Q6ZST2 131 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 ATCAYQ86WG3 371 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 RPS19BP1Q86WX3 136 aaKnown RBP13.83□□□□□ -0.2
CLRN1-203ENST00000328863 SLC2A12Q8TD20 617 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 HAS2Q92819 552 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 RBM18Q96H35 190 aaKnown RBP13.83□□□□□ -0.2
CLRN1-203ENST00000328863 UTP23Q9BRU9 249 aaKnown RBP13.83□□□□□ -0.2
CLRN1-203ENST00000328863 OR8D2Q9GZM6 311 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLRN1-203ENST00000328863 STMN3Q9NZ72 180 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 FIS1Q9Y3D6 152 aa13.83□□□□□ -0.2
CLRN1-203ENST00000328863 GLOD5A6NK44 160 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 RGS14O43566 566 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 ZFAND5O76080 213 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 CHN1P15882 459 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 OC90Q02509 493 aaPredicted RBP13.82□□□□□ -0.2
CLRN1-203ENST00000328863 ZNF763Q0D2J5 394 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 CASP8Q14790 479 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 KANK2Q63ZY3 851 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 SLC48A1Q6P1K1 146 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 GALNT18Q6P9A2 607 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 TRIM46Q7Z4K8 759 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 NUDCD3Q8IVD9 361 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 OR4N5Q8IXE1 308 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 HORMAD2Q8N7B1 307 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 OR1N1Q8NGS0 311 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms