RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 WFIKKN2Q8TEU8 576 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 WFDC6Q9BQY6 131 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 KCNK12Q9HB15 430 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 EHD3Q9NZN3 535 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 OBSL1O75147 1896 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 TSPAN11A1L157 253 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 TBC1D3BA6NDS4 549 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 SPINT1O43278 529 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 OR1F1O43749 312 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 LILRB5O75023 590 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 SRPRAP08240 638 aaKnown RBP13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 UGT2B15P54855 530 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 MXD1Q05195 221 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 TCEA2Q15560 299 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 NRSN1Q8IZ57 195 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 SMG7Q92540 1137 aaKnown RBP13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 UCK2Q9BZX2 261 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 TVP23BQ9NYZ1 205 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 TMEM221A6NGB7 291 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 AZGP1P25311 298 aaKnown RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 PIK3CBP42338 1070 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 PCBP3P57721 371 aaKnown RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 DOC2BQ14184 412 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 DESI1Q6ICB0 168 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 WDR53Q7Z5U6 358 aaPredicted RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 SPRED2Q7Z698 418 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 AMZ2Q86W34 360 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 FAM46DQ8NEK8 389 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 POLR2J3Q9H1A7 115 aaKnown RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 TEX10Q9NXF1 929 aaPredicted RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 SMIM30A4D0T7 59 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 M0R3H8 397 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 PRKRAO75569 313 aaKnown RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 OR12D1P0DN82 309 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 ADRB3P13945 408 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 SYPL1Q16563 259 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 KHDRBS2Q5VWX1 349 aaKnown RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 PLAG1Q6DJT9 500 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 ANKRD53Q8N9V6 530 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 GPR32P1Q8NGA4 272 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 CRELD1Q96HD1 420 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 CRISPLD2Q9H0B8 497 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 FKBP14Q9NWM8 211 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 CXXC1Q9P0U4 656 aaPredicted RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 NFKBIL1Q9UBC1 381 aaPredicted RBP13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 MOSPD1Q9UJG1 213 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 TSC22D4Q9Y3Q8 395 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 PCDHGA3Q9Y5H0 932 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 COL4A6Q14031 1691 aa13.35□□□□□ -0.27
ATP2C1-201ENST00000328560 LOC110117498-PIK3R3F6TDL0 507 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 CCRL2O00421 344 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 ERAL1O75616 437 aaKnown RBP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 RECKO95980 971 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 NR2F1P10589 423 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 WASP42768 502 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 XKP51811 444 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 LSRQ86X29 649 aaPredicted RBP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 LRRC56Q8IYG6 542 aaPredicted RBP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 C12orf76Q8N812 135 aaPredicted RBP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 KIAA1958Q8N8K9 716 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 AMER3Q8N944 861 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 SUSD6Q92537 303 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 TMEM203Q969S6 136 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 TM4SF18Q96CE8 201 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 ITPKCQ96DU7 683 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 AIF1LQ9BQI0 150 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 XKR8Q9H6D3 395 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 SNTG1Q9NSN8 517 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 POU2F3Q9UKI9 436 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 SAGE2PA6NJ88 616 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 ZAR1LA6NP61 321 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 H1F0P07305 194 aaKnown RBP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 DDCP20711 480 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 KELP23276 732 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 TGM4P49221 684 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 CCT3P49368 545 aaKnown RBP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 DAB2P98082 770 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 HEPACAMQ14CZ8 416 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 BCL7AQ4VC05 210 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 MLIPQ5VWP3 458 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 TCTN3Q6NUS6 607 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 PAQR6Q6TCH4 344 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 CCDC80Q76M96 950 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 ZNF367Q7RTV3 350 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 KLHDC8AQ8IYD2 350 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 FTSJ1Q9UET6 329 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 IRAK3Q9Y616 596 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 GPC6Q9Y625 555 aaPredicted RBP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 E9PQ18 207 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 GPX5O75715 221 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 HNRNPA1P09651 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 ACADLP28330 430 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 PCDH1Q08174 1060 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 MFSD4BQ5TF39 518 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms