RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ADGRD2Q7Z7M1 963 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 PARP16Q8N5Y8 322 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 L3MBTL4Q8NA19 623 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 OR4K5Q8NGD3 323 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 OR14C36Q8NHC7 312 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 BBS10Q8TAM1 723 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 ZNF486Q96H40 463 aaPredicted RBP14.08□□□□□ -0.15
TCOF1-201ENST00000323668 HRASLS5Q96KN8 279 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 CWH43Q9H720 699 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 LTBP4Q8N2S1 1624 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 ITGBL1O95965 494 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-201ENST00000323668 ADH5P11766 374 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 AP3S2P59780 193 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 RAB8AP61006 207 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 SLC35A2P78381 396 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 PRPF38BQ5VTL8 546 aaKnown RBP14.08□□□□□ -0.16
TCOF1-201ENST00000323668 GTF2IRD2BQ6EKJ0 949 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 HSDL2Q6YN16 418 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 GTF2IRD2Q86UP8 949 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 TMEM25Q86YD3 366 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 GNPDA2Q8TDQ7 276 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 NELL2Q99435 816 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 LTB4R2Q9NPC1 389 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 ASIC5Q9NY37 505 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 CNOT2Q9NZN8 540 aaKnown RBP14.08□□□□□ -0.16
TCOF1-201ENST00000323668 PCDHGB1Q9Y5G3 927 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 SCAMP1O15126 338 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 TEX28O15482 410 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 NDUFS4O43181 175 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 AGR2O95994 175 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 GPX2P18283 190 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 NRIP1P48552 1158 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 CLK3P49761 638 aaKnown RBP14.08□□□□□ -0.16
TCOF1-201ENST00000323668 SGSHP51688 502 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 PITPNAQ00169 270 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 AAK1Q2M2I8 961 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 MPP7Q5T2T1 576 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 KDM4DQ6B0I6 523 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 SORCS1Q8WY21 1168 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 CIDECQ96AQ7 238 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-201ENST00000323668 IL37Q9NZH6 218 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 HSFX1Q9UBD0 423 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 SBF2Q86WG5 1849 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 TMX2-CTNND1H3BSU7 103 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 HCN1O60741 890 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 ALPPL2P10696 532 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 PEPDP12955 493 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 CR2P20023 1033 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 FAUP35544 74 aaKnown RBP14.08□□□□□ -0.16
TCOF1-201ENST00000323668 MC1RQ01726 317 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 FAM180BQ6P0A1 224 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 CHMP1BQ7LBR1 199 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 KLK6Q92876 244 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 MBOAT4Q96T53 435 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 PDFQ9HBH1 243 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 GPN1Q9HCN4 374 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-201ENST00000323668 PSORS1C1Q9UIG5 152 aa14.08□□□□□ -0.16
TCOF1-201ENST00000323668 MRPS33Q9Y291 106 aaKnown RBP14.08□□□□□ -0.16
TCOF1-201ENST00000323668 CTDSP2O14595 271 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 OMPP47874 163 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 GMFBP60983 142 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 ABATP80404 500 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 UGT8Q16880 541 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 CCDC116Q8IYX3 515 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 GPR151Q8TDV0 419 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 SGCDQ92629 289 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 ECHDC3Q96DC8 303 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 CLIP3Q96DZ5 547 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 CASD1Q96PB1 797 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 MCHR1Q99705 422 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 SLC25A37Q9NYZ2 338 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 TRIP11Q15643 1979 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 LRRC72A6NJI9 287 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 RCBTB2O95199 551 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 F8A1P23610 371 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 GP2P55259 537 aaKnown RBP14.07□□□□□ -0.16
TCOF1-201ENST00000323668 OXA1LQ15070 435 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 TOMM5Q8N4H5 51 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 NDC1Q9BTX1 674 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 HCSTQ9UBK5 93 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 CORINQ9Y5Q5 1042 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 A0A1W2PQL4 384 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-201ENST00000323668 TTC34A8MYJ7 566 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 SERPINA3P01011 423 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 RLN1P04808 185 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 IFI30P13284 250 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 HLA-EP13747 358 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 CTSEP14091 401 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 CTSOP43234 321 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-201ENST00000323668 MLLT10P55197 1068 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 HBA1P69905 142 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 LRIF1Q5T3J3 769 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 ANKRD34AQ69YU3 496 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-201ENST00000323668 SLC7A5P1Q8MH63 180 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 GATAD2BQ8WXI9 593 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 UBE2FQ969M7 185 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 CD180Q99467 661 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 OR51I1Q9H343 314 aa14.07□□□□□ -0.16
TCOF1-201ENST00000323668 IKZF5Q9H5V7 419 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms