RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 XKP51811 444 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 WDR5P61964 334 aaKnown RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 SREBF2Q12772 1141 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 DCST1Q5T197 706 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 TCTN3Q6NUS6 607 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 CASP12Q6UXS9 341 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 Q6ZVU0 165 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 CREB3L4Q8TEY5 395 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 DMRTB1Q96MA1 342 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 FUZQ9BT04 418 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 RSPO3Q9BXY4 272 aaPredicted RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 SLC6A16Q9GZN6 736 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 CXorf36Q9H7Y0 433 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 DYRK1BQ9Y463 629 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 SOX14O95416 240 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 ALPPP05187 535 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 DDX5P17844 614 aaKnown RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 PDHA2P29803 388 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 OPRD1P41143 372 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 C1DQ13901 141 aaKnown RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 ZNF658BQ4V348 819 aaPredicted RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 IER5LQ5T953 404 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 PGBD2Q6P3X8 592 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 UTS2BQ765I0 119 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 GDPD1Q8N9F7 314 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 TMEM246Q9BRR3 403 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 NLNQ9BYT8 704 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 MMP28Q9H239 520 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 SLA2Q9H6Q3 261 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 ABCB9Q9NP78 766 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 TXNL4BQ9NX01 149 aaKnown RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 TAAR2Q9P1P5 351 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 CDRT1O95170 752 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 TP53P04637 393 aaPredicted RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 URODP06132 367 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 KLK1P06870 262 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 IL3P08700 152 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 CSF3P09919 207 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 FOXD4Q12950 439 aaPredicted RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 RPS26P11Q5JNZ5 115 aaPredicted RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 SLC25A30Q5SVS4 291 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 SAXO2Q658L1 398 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 ASTLQ6HA08 431 aaPredicted RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 CEACAM20Q6UY09 585 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 GAREM2Q75VX8 874 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 VWA5B2Q8N398 1253 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 OR2A12Q8NGT7 310 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 SLC38A5Q8WUX1 472 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 KIAA1143Q96AT1 154 aaPredicted RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 NEURL3Q96EH8 262 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 PLEKHB1Q9UF11 243 aaPredicted RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 ACAD8Q9UKU7 415 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 HCN2Q9UL51 889 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 DIMT1Q9UNQ2 313 aaKnown RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 PITPNM1O00562 1244 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 PLD2O14939 933 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 MSL3P1P0C860 447 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 CPEP16870 476 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 GABRR2P28476 465 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 DGKGP49619 791 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 BNC1Q01954 994 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 ALDH6A1Q02252 535 aaKnown RBP18.16■□□□□ 0.5
RTN4-201ENST00000317610 HEPACAMQ14CZ8 416 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 TAB1Q15750 504 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 SLC35F1Q5T1Q4 408 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 LIPKQ5VXJ0 399 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 HIST2H2AA3Q6FI13 130 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 ERAP2Q6P179 960 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 PAQR6Q6TCH4 344 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 FAM131AQ6UXB0 335 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 HSDL2Q6YN16 418 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 FAM26EQ8N5C1 309 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 TCEANCQ8N8B7 351 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 GLYATL1Q969I3 302 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 KLHL20Q9Y2M5 609 aa18.16■□□□□ 0.5
RTN4-201ENST00000317610 B4DXG7 233 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 MYL12BO14950 172 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 OR10H3O60404 316 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 H1F0P07305 194 aaKnown RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 GPAT3Q53EU6 434 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 TECPR1Q7Z6L1 1165 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 DDX53Q86TM3 631 aaKnown RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 NOXA1Q86UR1 476 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 HORMAD2Q8N7B1 307 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 MRPS31Q92665 395 aaKnown RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 TEFMQ96QE5 360 aaKnown RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 MED18Q9BUE0 208 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 C11orf54Q9H0W9 315 aaPredicted RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 POLR2J3Q9H1A7 115 aaKnown RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 SPNS1Q9H2V7 528 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 RNF186Q9NXI6 227 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 MAU2Q9Y6X3 613 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 TSPAN11A1L157 253 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 CCDC182A6NF36 153 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 C5orf58C9J3I9 102 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 YES1P07947 543 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 MLLT3P42568 568 aaPredicted RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 GSTM5P46439 218 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 ZNF284Q2VY69 593 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms