RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 LALBAP00709 142 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 F8A1P23610 371 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ABATP80404 500 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 BCL2L1Q07817 233 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF763Q0D2J5 394 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 DDX39BQ13838 428 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PYHIN1Q6K0P9 492 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ADGRG3Q86Y34 549 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CLDN19Q8N6F1 224 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 HJURPQ8NCD3 748 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TRPM4Q8TD43 1214 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SCMH1Q96GD3 660 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ZSCAN5AQ9BUG6 496 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SERHL2Q9H4I8 314 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLC28A3Q9HAS3 691 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 IL26Q9NPH9 171 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 NMRK2Q9NPI5 230 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SEMA3GQ9NS98 782 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 MED9Q9NWA0 146 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PRAMEF33A0A0G2JMD5 474 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 A0A0U1RQS6 177 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 KDM4FA0A1W2PPD8 638 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ANKDD1BA6NHY2 528 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CASC3O15234 703 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CHP2O43745 196 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PRAMEF10O60809 474 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 GPR37L1O60883 481 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CSO75390 466 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CPEP16870 476 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 DNASE1P24855 282 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ACRV1P26436 265 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SERPINA4P29622 427 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CCND3P30281 292 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SMSP52788 366 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PCBP3P57721 371 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 EN1Q05925 392 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 XKR6Q5GH73 641 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 HBMQ6B0K9 141 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF770Q6IQ21 691 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 FAM151BQ6UXP7 276 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 QSOX2Q6ZRP7 698 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PRSS42Q7Z5A4 293 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 GALNT10Q86SR1 603 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 LRRC28Q86X40 367 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLITRK4Q8IW52 837 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CLECL1Q8IZS7 167 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TCEANCQ8N8B7 351 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 OVCA2Q8WZ82 227 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RFT1Q96AA3 541 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 GPR137Q96N19 417 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RLIMQ9NVW2 624 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ZSCAN32Q9NX65 697 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PRKAG2Q9UGJ0 569 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PTPRFP10586 1907 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 UBR3Q6ZT12 1888 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLX4Q8IY92 1834 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 A0A0G2JMP0 313 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CXorf51AA0A1B0GTR3 108 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 M0R233 179 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 KPNA3O00505 521 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PCDH17O14917 1159 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 LATS1O95835 1130 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 OPN1SWP03999 348 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 FHP07954 510 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RRASP10301 218 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 GPR17Q13304 367 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CTXN3Q4LDR2 81 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 HECTD3Q5T447 861 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ADGRF1Q5T601 910 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 GPR139Q6DWJ6 353 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 C22orf42Q6IC83 251 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ARSKQ6UWY0 536 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PAMR1Q6UXH9 720 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 KCTD20Q7Z5Y7 419 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 NLGN4YQ8NFZ3 816 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SPATA17Q96L03 361 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 HDHD2Q9H0R4 259 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RC3H2Q9HBD1 1191 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 LYARQ9NX58 379 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RDH8Q9NYR8 311 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TRPM5Q9NZQ8 1165 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ACSL5Q9ULC5 683 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CDH10Q9Y6N8 788 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 A0A1W2PRB8 838 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM127O75204 238 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 F11P03951 625 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 HMGN1P05114 100 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 POU2F1P14859 743 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PPP2R1BP30154 601 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CHI3L1P36222 383 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ATP6V1E1P36543 226 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 DSTNP60981 165 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TRILQ7L0X0 811 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PDZD3Q86UT5 571 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TIGD4Q8IY51 512 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 DCAF4L2Q8NA75 395 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 OR52P1PQ8NH57 321 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 FOPNLQ96NB1 174 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TM9SF2Q99805 663 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PELOQ9BRX2 385 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms