RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 RFX7Q2KHR2 1363 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 MUC21A0A0G2JKD1 596 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 FAM90A10PA6NDY2 464 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 LYRM9A8MSI8 78 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 GFRA2O00451 464 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 UPK2O00526 184 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 CYR61O00622 381 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 LEFTY1O75610 366 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 UPK3AO75631 287 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 EML2O95834 649 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 MBPP02686 304 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 CHRM4P08173 479 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 ATF3P18847 181 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 ACHEP22303 614 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 HNRNPH3P31942 346 aaKnown RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 CAPGP40121 348 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 OR3A2P47893 321 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 GPR143P51810 404 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 CTBP2P56545 445 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 GLO1Q04760 184 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 IL10RBQ08334 325 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 KIR2DS3Q14952 304 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 GPR68Q15743 365 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 ITPRIPL2Q3MIP1 535 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 GLYR1Q49A26 553 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 PIGGQ5H8A4 983 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 RBM48Q5RL73 367 aaKnown RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 ZNF678Q5SXM1 525 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TSTD2Q5T7W7 516 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 FAM199XQ6PEV8 388 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 ABI3BPQ7Z7G0 1075 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 LRRTM1Q86UE6 522 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 SLC26A11Q86WA9 606 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 OSTM1Q86WC4 334 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 CACUL1Q86Y37 369 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 NT5DC4Q86YG4 428 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 LAX1Q8IWV1 398 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 DRAXINQ8NBI3 349 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 OR52L2PQ8NGH6 319 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 STT3BQ8TCJ2 826 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 STK32AQ8WU08 396 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 CHPT1Q8WUD6 406 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 HAS1Q92839 578 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 C3orf49Q96BT1 292 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 C16orf45Q96MC5 204 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 PSMG3-AS1Q96PY0 264 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 SLC29A1Q99808 456 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 VPS25Q9BRG1 176 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 C20orf27Q9GZN8 174 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 CARD9Q9H257 536 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 GOLPH3Q9H4A6 298 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 MED20Q9H944 212 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 COPS7BQ9H9Q2 264 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 NMUR1Q9HB89 426 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 BABAM2Q9NXR7 383 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 ING3Q9NXR8 418 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 VSX1Q9NZR4 365 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 ANAPC2Q9UJX6 822 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 RUVBL2Q9Y230 463 aaKnown RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 UBIAD1Q9Y5Z9 338 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 PPLO60437 1756 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3DA0A087WVF3 549 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3IA0A087WXS9 549 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3EA0A087X179 549 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3KA0A087X1G2 549 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3BA6NDS4 549 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3FA6NER0 549 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 RNF212BA8MTL3 300 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3LB9A6J9 549 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 G3V4G9 280 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 PDLIM1O00151 329 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 GRM8O00222 908 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 SHOXO15266 292 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 FFAR2O15552 330 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 CTIFO43310 598 aaKnown RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 PDCD6O75340 191 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 SAP30O75446 220 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3HP0C7X1 549 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 DANCRP0C864 163 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 AMY2BP19961 511 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 CA4P22748 312 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 IGFBP5P24593 272 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 PTPN3P26045 913 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 RRM2P31350 389 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 HARS2P49590 506 aaKnown RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 SERPINB9P50453 376 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 PRRX1P54821 245 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 KCNJ10P78508 379 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 ID3Q02535 119 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 MFGE8Q08431 387 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 EIF4HQ15056 248 aaKnown RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 TMEM249Q2WGJ8 235 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 CFAP221Q4G0U5 840 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 ARL13AQ5H913 290 aaPredicted RBP1.16□□□□□ -2.22
CEP290-201ENST00000309041 C9orf152Q5JTZ5 239 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 SNAP47Q5SQN1 464 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 UTF1Q5T230 341 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 PRAMEF18Q5VWM3 479 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D3GQ6DHY5 549 aa1.16□□□□□ -2.22
CEP290-201ENST00000309041 RAET1GQ6H3X3 334 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms