RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PRDM9Q9NQV7 894 aa5.18□□□□□ -1.58
VPS50-202ENST00000305866 HCSTQ9UBK5 93 aa5.18□□□□□ -1.58
VPS50-202ENST00000305866 WARS2Q9UGM6 360 aaKnown RBP5.18□□□□□ -1.58
VPS50-202ENST00000305866 ZNF221Q9UK13 617 aa5.18□□□□□ -1.58
VPS50-202ENST00000305866 TBX21Q9UL17 535 aa5.18□□□□□ -1.58
VPS50-202ENST00000305866 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS50-202ENST00000305866 YARS2Q9Y2Z4 477 aaKnown RBP5.18□□□□□ -1.58
VPS50-202ENST00000305866 C2orf16Q68DN1 1984 aa5.18□□□□□ -1.58
VPS50-202ENST00000305866 DOCK9Q9BZ29 2069 aa5.18□□□□□ -1.58
VPS50-202ENST00000305866 TRBV4-1A0A0J9YWV2 114 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TMEM202A6NGA9 273 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 CCRL2O00421 344 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ASNA1O43681 348 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 MOSPD3O75425 235 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SOD1P00441 154 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 S100BP04271 92 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 MAGP20916 626 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SLC6A1P30531 599 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 OR3A3P47888 321 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SERPINB10P48595 397 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 STK19P49842 368 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 HTRA4P83105 476 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 ALDH6A1Q02252 535 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 MLLT11Q13015 90 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 TPBGQ13641 420 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FHL1Q13642 323 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 NCF4Q15080 339 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TSTQ16762 297 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 SPIN4Q56A73 249 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 MFSD4BQ5TF39 518 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FRG2Q64ET8 278 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 PRICKLE2Q7Z3G6 844 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 BCDIN3DQ7Z5W3 292 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 CADM2Q8N3J6 435 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FAM26EQ8N5C1 309 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ZNF366Q8N895 744 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 OR52I1Q8NGK6 324 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 RPS4Y2Q8TD47 263 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 GIPC2Q8TF65 315 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 NELL1Q92832 810 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 CLP1Q92989 425 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 OTUB2Q96DC9 234 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 EXOC2Q96KP1 924 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SORCS2Q96PQ0 1159 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FRG2BQ96QU4 278 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 DPY30Q9C005 99 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 MYNNQ9NPC7 610 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 PAQR5Q9NXK6 330 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 NUFIP1Q9UHK0 495 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 RUVBL1Q9Y265 456 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 POFUT2Q9Y2G5 429 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SNX5Q9Y5X3 404 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 EYSQ5T1H1 3165 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 SPEGQ15772 3267 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 K7ERQ8 282 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TRIM3O75382 744 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 IL1AP01583 271 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FURINP09958 794 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 LIMS3P0CW19 117 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 LIMS4P0CW20 117 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ATP1B2P14415 290 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 CD72P21854 359 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ELAVL4P26378 380 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 SERPINB1P30740 379 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FXYD6P3P58550 94 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 BCL2L1Q07817 233 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 MAP4K2Q12851 820 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 CEBPEQ15744 281 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 CCSMST1Q4G0I0 132 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ZRANB3Q5FWF4 1079 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ANXA8L1Q5VT79 327 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 FAM71E1Q6IPT2 247 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TCTN3Q6NUS6 607 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 XKRXQ6PP77 449 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 PRSS55Q6UWB4 352 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 PAMR1Q6UXH9 720 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TMIGD1Q6UXZ0 262 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ZNF517Q6ZMY9 492 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 ARMCX6Q7L4S7 300 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 DNAJB7Q7Z6W7 309 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 TSPAN33Q86UF1 283 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 ADIPOR2Q86V24 386 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 GALNT12Q8IXK2 581 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 CMIPQ8IY22 773 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 VWA5B2Q8N398 1253 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 LSMEM1Q8N8F7 131 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 DBF4BQ8NFT6 615 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TMEM43Q9BTV4 400 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 THUMPD3Q9BV44 507 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 SPNS1Q9H2V7 528 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TPT1P8Q9HAU6 139 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 A4GALTQ9NPC4 353 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TAS2R7Q9NYW3 318 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 DIMT1Q9UNQ2 313 aaKnown RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 SLC27A6Q9Y2P4 619 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 KLF2Q9Y5W3 355 aaPredicted RBP5.17□□□□□ -1.58
VPS50-202ENST00000305866 KIAA0355O15063 1070 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 TBL1XO60907 577 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 MFN2O95140 757 aa5.17□□□□□ -1.58
VPS50-202ENST00000305866 LYPD3O95274 346 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms