RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ANKRD9Q96BM1 317 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 MTFMTQ96DP5 389 aaKnown RBP15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 PHF12Q96QT6 1004 aa15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 DMRTA2Q96SC8 542 aa15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 LRRC1Q9BTT6 524 aa15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 FUT8Q9BYC5 575 aa15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 OR51B5Q9H339 312 aa15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 COQ3Q9NZJ6 369 aa15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 PPT2Q9UMR5 302 aa15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 IKBKGQ9Y6K9 419 aa15.46■□□□□ 0.07
TRAPPC1-201ENST00000303731 A0A1B0GTH9 108 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 HMX2A2RU54 273 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 FOXE1O00358 373 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 SAP18O00422 153 aaKnown RBP15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 PLPP1O14494 284 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 CDC40O60508 579 aaKnown RBP eCLIP15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 OR6B1O95007 311 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 ALDOAP04075 364 aaKnown RBP15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 INHBAP08476 426 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 RBP1P09455 135 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 SOX3P41225 446 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 SERPINB9P50453 376 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 GPR85P60893 370 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 PLGLB1Q02325 96 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 ST13P4Q8IZP2 240 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 SLC15A4Q8N697 577 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 L3MBTL4Q8NA19 623 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 OR2M7Q8NG81 312 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 SLC22A8Q8TCC7 542 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 ZNF721Q8TF20 911 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 MRRFQ96E11 262 aaKnown RBP15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 MTERF1Q99551 399 aaKnown RBP15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 FAM173AQ9BQD7 235 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 TP63Q9H3D4 680 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 IPPKQ9H8X2 491 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 WDR41Q9HAD4 459 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 NINJ2Q9NZG7 142 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 DNAJC13O75165 2243 aa15.45■□□□□ 0.06
TRAPPC1-201ENST00000303731 ZNF407Q9C0G0 2248 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 FGF17O60258 216 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 SH3BGRLO75368 114 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 CLDN9O95484 217 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 ETHE1O95571 254 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 TPOP07202 933 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 PRF1P14222 555 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 ALOX15P16050 662 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 CNR1P21554 472 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 CNTFP26441 200 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 RFC3P40938 356 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 RPS13P62277 151 aaKnown RBP15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 PPIAP62937 165 aaKnown RBP15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 FOLH1Q04609 750 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 CPSF6Q16630 551 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 TSNAXIP1Q2TAA8 658 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 CYP20A1Q6UW02 462 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 GOLGA7Q7Z5G4 137 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 FGD2Q7Z6J4 655 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 CD163Q86VB7 1156 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 NUDT13Q86X67 352 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 MNS1Q8NEH6 495 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 SLC44A1Q8WWI5 657 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 ISL2Q96A47 359 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 SENP5Q96HI0 755 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 FBXL20Q96IG2 436 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 GPR78Q96P69 363 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 DDX31Q9H8H2 851 aaKnown RBP15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 ZDHHC11Q9H8X9 412 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 LIN28AQ9H9Z2 209 aaKnown RBP15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 SACM1LQ9NTJ5 587 aa15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 CPSF2Q9P2I0 782 aaKnown RBP15.44■□□□□ 0.06
TRAPPC1-201ENST00000303731 OR14I1A6ND48 311 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 STX16-NPEPL1H3BU86 382 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 STX16O14662 325 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 ADAM10O14672 748 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 PROM1O43490 865 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 KRT38O76015 456 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 URI1O94763 535 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 SEMA3DO95025 777 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 IGKV3-11P04433 115 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 P04436 131 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 NR2F6P10588 404 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 COL6A2P12110 1019 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 GALNSP34059 522 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 ID2Q02363 134 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 SPRED3Q2MJR0 410 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 GLE1Q53GS7 698 aaKnown RBP15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 PIGGQ5H8A4 983 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 TECRLQ5HYJ1 363 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 C16orf47Q6ZP98 133 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 SRRM1Q8IYB3 904 aaKnown RBP15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 MMGT1Q8N4V1 131 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 ZNF321PQ8N8H1 164 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 WDR20Q8TBZ3 569 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 CA5BP1Q8WTZ4 195 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 ASB5Q8WWX0 329 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 ATP6V1E2Q96A05 226 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 SCYL1Q96KG9 808 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 SERPINI1Q99574 410 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 TTTY12Q9BZ98 90 aa15.43■□□□□ 0.06
TRAPPC1-201ENST00000303731 VPS11Q9H270 941 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms