RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 E7EQ34 232 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TNFP01375 233 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 OPN1SWP03999 348 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 UCHL1P09936 223 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 AGXTP21549 392 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 CD9P21926 228 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 CDKN2CP42773 168 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SCAPQ12770 1279 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF169Q14929 603 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 GSG1LQ6UXU4 331 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 VWA5B2Q8N398 1253 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 CHDHQ8NE62 594 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 FAM110BQ8TC76 370 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 PROKR1Q8TCW9 393 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TCTEX1D2Q8WW35 142 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 BORCS8Q96FH0 119 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM41AQ96HV5 264 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TAC3Q9UHF0 121 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TOGARAM1Q9Y4F4 1720 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 HYKKA2RU49 373 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 F5H0A9 414 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SCAMP2O15127 329 aaKnown RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TGM6O95932 706 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SMPD1P17405 629 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 DLSTP36957 453 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 CHAF1BQ13112 559 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ITPRIPL2Q3MIP1 535 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SLC9B2Q86UD5 537 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 THEM6Q8WUY1 208 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ERLEC1Q96DZ1 483 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 IL12RB2Q99665 862 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 RIOK2Q9BVS4 552 aaKnown RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 BRF2Q9HAW0 419 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 KLRF1Q9NZS2 232 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 GSKIPQ9P0R6 139 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 NEMP2A6NFY4 417 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 VSTM5A8MXK1 200 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SOX14O95416 240 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TGFB1P01137 390 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ETV6P41212 452 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 MS4A13Q5J8X5 152 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 AADACL4Q5VUY2 407 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 CEACAM19Q7Z692 300 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 PQLC3Q8N755 202 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SNAPC3Q92966 411 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 LRIG1Q96JA1 1093 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 AIG1Q9NVV5 245 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 JRKO75564 520 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 HRGP04196 525 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 MAOAP21397 527 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 MLLT6P55198 1093 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 FLYWCH1Q4VC44 716 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SYNPOQ8N3V7 929 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 OR13C3Q8NGS6 347 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 NPY6RQ99463 290 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 PTGES2Q9H7Z7 377 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SMOXQ9NWM0 555 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 LOC100509620A0A075B734 347 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 UNCXA6NJT0 531 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 CD3GP09693 182 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 DRD2P14416 443 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 RBMS1P29558 406 aaKnown RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 RPS13P62277 151 aaKnown RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 SPHARQ15513 63 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 PRAMEF19Q5SWL8 479 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 KLHL9Q9P2J3 617 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ACSL6Q9UKU0 697 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 PKD1L3Q7Z443 1732 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 TTC24A2A3L6 582 aaPredicted RBP7.34□□□□□ -1.24
SF3B3-201ENST00000302516 TRIM64A6NGJ6 449 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 SOCS2O14508 198 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 DDNO94850 711 aaPredicted RBP7.34□□□□□ -1.24
SF3B3-201ENST00000302516 IFNA4P05014 189 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 FDXRP22570 491 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 MAN2A2P49641 1150 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 GINS1Q14691 196 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 UNQ6126/PRO20091Q6UXV3 157 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 DHRS1Q96LJ7 313 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 MYRFLQ96LU7 910 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 ARL6Q9H0F7 186 aa7.34□□□□□ -1.24
SF3B3-201ENST00000302516 SULT1C2O00338 296 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SDHDO14521 159 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 CRYZL1O95825 349 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 PLGP00747 810 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 RING1Q06587 406 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 NFATC2Q13469 925 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 PTCHD3Q3KNS1 767 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ALG10BQ5I7T1 473 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF776Q68DI1 518 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 BEST4Q8NFU0 473 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 RBP7Q96R05 134 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SECISBP2Q96T21 854 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ATG5Q9H1Y0 275 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 IKZF4Q9H2S9 585 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 TIGARQ9NQ88 270 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 EBF1Q9UH73 591 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 AKAP11Q9UKA4 1901 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 AMY2BP19961 511 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 NCS1P62166 190 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 PDGFRLQ15198 375 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms