RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 RAB40ALP0C0E4 278 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 TCN2P20062 427 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 CAPN3P20807 821 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 MAOAP21397 527 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 AGXTP21549 392 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 IL10P22301 178 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 CD82P27701 267 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 PPP2R1BP30154 601 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 HSD17B7P56937 341 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 RPS18P62269 152 aaKnown RBP8.9□□□□□ -0.98
RFX3-201ENST00000302303 SKP1P63208 163 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 IRX1P78414 480 aaPredicted RBP8.9□□□□□ -0.98
RFX3-201ENST00000302303 ID2Q02363 134 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 FOLH1Q04609 750 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 MGAT2Q10469 447 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 RCAN2Q14206 197 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 SQLEQ14534 574 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 HEPACAMQ14CZ8 416 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 TLR1Q15399 786 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 FAM91A1Q658Y4 838 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 C6orf89Q6UWU4 347 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 QSOX2Q6ZRP7 698 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 ZNF595Q8IYB9 648 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 MIER2Q8N344 545 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 ESX1Q8N693 406 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 CCDC197Q8NCU1 140 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 OR8J2Q8NGG1 315 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 CDC26Q8NHZ8 85 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 TANKQ92844 425 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 TSLPQ969D9 159 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 CIDECQ96AQ7 238 aaPredicted RBP8.9□□□□□ -0.98
RFX3-201ENST00000302303 MTERF3Q96E29 417 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 ZNF578Q96N58 590 aaPredicted RBP8.9□□□□□ -0.98
RFX3-201ENST00000302303 DPY30Q9C005 99 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 SOX17Q9H6I2 414 aaPredicted RBP8.9□□□□□ -0.98
RFX3-201ENST00000302303 SERHLQ9NQF3 203 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 TMEM45AQ9NWC5 275 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 CCDC167Q9P0B6 97 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 IL17BQ9UHF5 180 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 CROTQ9UKG9 612 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 TRIM33Q9UPN9 1127 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 AK5Q9Y6K8 562 aa8.9□□□□□ -0.98
RFX3-201ENST00000302303 NUP210LQ5VU65 1888 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 TCRBV16S1A1N1A0A5B0 115 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 FAM234BA2RU67 622 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 PSMD12O00232 456 aaPredicted RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 FBP2O00757 339 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 GPR75O95800 540 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 C8orf89P0DMQ9 161 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 HOXB9P17482 250 aaPredicted RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 PIK3R1P27986 724 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 PTPN6P29350 595 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 ADSLP30566 484 aaPredicted RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 PTGER1P34995 402 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 BUD31P41223 144 aaPredicted RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 ALDH9A1P49189 494 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 CLN3Q13286 438 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 TERF2Q15554 542 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 FAM174BQ3ZCQ3 159 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 AGKQ53H12 422 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 OR4F3Q6IEY1 312 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 TMEM205Q6UW68 189 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 GK5Q6ZS86 529 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 RETREG3Q86VR2 466 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 PRSS58Q8IYP2 241 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 CACNA2D3Q8IZS8 1091 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 ENDOVQ8N8Q3 282 aaKnown RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 SIMC1Q8NDZ2 872 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 ADAMTS18Q8TE60 1221 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 VPS33AQ96AX1 596 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 MIEF2Q96C03 454 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 NXPE2Q96DL1 559 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 WDR77Q9BQA1 342 aaPredicted RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 YIPF2Q9BWQ6 316 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 SLC35C2Q9NQQ7 365 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 PRTFDC1Q9NRG1 225 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 THSD1Q9NS62 852 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 SLC6A13Q9NSD5 602 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 MAP10Q9P2G4 905 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 DKK4Q9UBT3 224 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 UTS2RQ9UKP6 389 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 TCFL5Q9UL49 500 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 MKL2Q9ULH7 1088 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 FARSAQ9Y285 508 aaKnown RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 PCDHGA6Q9Y5G7 932 aa8.9□□□□□ -0.99
RFX3-201ENST00000302303 MRPS18BQ9Y676 258 aaKnown RBP8.9□□□□□ -0.99
RFX3-201ENST00000302303 IDSB3KWA1 339 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 CCDC22O60826 627 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 GUCY1B2O75343 617 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 PGRP06401 933 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 CCNYL3P0C7X3 344 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 T-ENOLP0DO92 83 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 LIPCP11150 499 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 PCSK2P16519 638 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 EFNA1P20827 205 aaPredicted RBP8.89□□□□□ -0.99
RFX3-201ENST00000302303 S1PR1P21453 382 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 PTPN4P29074 926 aa8.89□□□□□ -0.99
RFX3-201ENST00000302303 FEN1P39748 380 aaKnown RBP8.89□□□□□ -0.99
RFX3-201ENST00000302303 XKP51811 444 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms