RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 FAM186AA6NE01 2351 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 SLC30A4O14863 429 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 FGF18O76093 207 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 RB1P06400 928 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 LAG3P18627 525 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 RORCP51449 518 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 LIPJQ5W064 366 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 XAF1Q6GPH4 301 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 REEP3Q6NUK4 255 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 SYCE2Q6PIF2 218 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 ELMOD2Q8IZ81 293 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 OR6Q1Q8NGQ2 317 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 PHOX2BQ99453 314 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 TSSK6Q9BXA6 273 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 MAGIXQ9H6Y5 334 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 PDE9AO76083 593 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 CXCR2P25025 360 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 GAB1Q13480 694 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 SPHARQ15513 63 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 HSDL2Q6YN16 418 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 GAREM2Q75VX8 874 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 RNF44Q7L0R7 432 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 ENTHD1Q8IYW4 607 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 ZNF683Q8IZ20 524 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 GGHQ92820 318 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 C11orf24Q96F05 449 aaPredicted RBP13.41□□□□□ -0.26
SDC2-201ENST00000302190 FAIM2Q9BWQ8 316 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 SPEGQ15772 3267 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3DA0A087WVF3 549 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3IA0A087WXS9 549 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3EA0A087X179 549 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3KA0A087X1G2 549 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3FA6NER0 549 aaPredicted RBP13.41□□□□□ -0.26
SDC2-201ENST00000302190 CENPBD1B2RD01 187 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3LB9A6J9 549 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 ANHXE9PGG2 379 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3HP0C7X1 549 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 PRG2P13727 222 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 BMP7P18075 431 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 SLC19A1P41440 591 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 VIPR2P41587 438 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 SELENOWP63302 87 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBRG1Q3YBR2 411 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 IDNKQ5T6J7 187 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 STEAP3Q658P3 488 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3GQ6DHY5 549 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3CQ6IPX1 549 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D3Q8IZP1 549 aaPredicted RBP13.41□□□□□ -0.26
SDC2-201ENST00000302190 ANKK1Q8NFD2 765 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 OR5AR1Q8NGP9 310 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 DPF3Q92784 378 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 NUS1Q96E22 293 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 DNAJA3Q96EY1 480 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 TMEM19Q96HH6 336 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 LRR1Q96L50 414 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 WACQ9BTA9 647 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 NMNAT1Q9HAN9 279 aaPredicted RBP13.41□□□□□ -0.26
SDC2-201ENST00000302190 CDV3Q9UKY7 258 aaKnown RBP13.41□□□□□ -0.26
SDC2-201ENST00000302190 TBX21Q9UL17 535 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 ZNF860A6NHJ4 632 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 ENTPD6O75354 484 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 PRSS23O95084 383 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 PSMB5P28074 263 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 CRISP1P54107 249 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 SEC13P55735 322 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 GPR68Q15743 365 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 ZDHHC20Q5W0Z9 365 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 CELF2-AS1Q8N7Q2 184 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 OR10H4Q8NGA5 316 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 OR9A1PQ8NGU1 263 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 PIGKQ92643 395 aa13.41□□□□□ -0.26
SDC2-201ENST00000302190 ZBED6CLQ96FA7 236 aaPredicted RBP13.41□□□□□ -0.26
SDC2-201ENST00000302190 DUS3LQ96G46 650 aaKnown RBP13.41□□□□□ -0.26
SDC2-201ENST00000302190 ZNF300Q96RE9 604 aaPredicted RBP13.41□□□□□ -0.26
SDC2-201ENST00000302190 CKAP5Q14008 2032 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 C1GALT1C1LP0DN25 315 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 TIE1P35590 1138 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 CSTF1Q05048 431 aaKnown RBP13.4□□□□□ -0.26
SDC2-201ENST00000302190 SLC8B1Q6J4K2 584 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 ZNF480Q8WV37 535 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 RNF31Q96EP0 1072 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 PIP5K1AQ99755 562 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 GAL3ST1Q99999 423 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 CRISPLD2Q9H0B8 497 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 MAPRE3Q9UPY8 281 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 PCDHGB6Q9Y5F9 930 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 ETHE1O95571 254 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 RPN2P04844 631 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 TGM4P49221 684 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 GNG2P59768 71 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 INAVAQ3KP66 663 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 TRIM46Q7Z4K8 759 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 C6orf120Q7Z4R8 191 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.4□□□□□ -0.26
SDC2-201ENST00000302190 ZNF433Q8N7K0 673 aaPredicted RBP13.4□□□□□ -0.26
SDC2-201ENST00000302190 RASGEF1AQ8N9B8 481 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 FAM46DQ8NEK8 389 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 OR14C36Q8NHC7 312 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms