RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 C19orf48Q6RUI8 117 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 LCTLQ6UWM7 567 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 DEF8Q6ZN54 512 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 IKBIPQ70UQ0 350 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 C6orf120Q7Z4R8 191 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 SETD7Q8WTS6 366 aaKnown RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 EXOSC8Q96B26 276 aaKnown RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 LINC00615Q96LM1 132 aaPredicted RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 OPALINQ96PE5 141 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 ZCCHC2Q9C0B9 1178 aaKnown RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 SLC25A19Q9HC21 320 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 CLN6Q9NWW5 311 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 KLK4Q9Y5K2 254 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 KIF26AQ9ULI4 1882 aaPredicted RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 EFCAB10A6NFE3 127 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 C5orf58C9J3I9 102 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 TLR4O00206 839 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 HMGN4O00479 90 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 SSX4O60224 188 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 TMPRSS11DO60235 418 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 DLGAP3O95886 979 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 PRNPP04156 253 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 ITGB7P26010 798 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 ELAVL4P26378 380 aaKnown RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 SERPINB1P30740 379 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 SOX3P41225 446 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 TPTEP56180 551 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 LSM11P83369 360 aaKnown RBP eCLIP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 FNDC3BQ53EP0 1204 aaKnown RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 TUBA3EQ6PEY2 450 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 OTUB1Q96FW1 271 aaPredicted RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 SDHCQ99643 169 aaPredicted RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 LGR4Q9BXB1 951 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 DPEP2Q9H4A9 486 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 MVB12BQ9H7P6 319 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 SP140LQ9H930 580 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 TEX10Q9NXF1 929 aaPredicted RBP12.94□□□□□ -0.34
BCCIP-202ENST00000299130 SPATA7Q9P0W8 599 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 A3GALT2U3KPV4 340 aa12.94□□□□□ -0.34
BCCIP-202ENST00000299130 C5orf42Q9H799 3197 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 C17orf113A0A1B0GUU1 675 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 ANHXE9PGG2 379 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 H7BY64 318 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 PDPK1O15530 556 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 TIMP1P01033 207 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 STATHP02808 62 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 S100A5P33763 92 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 VEGFBP49765 207 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 PRKCDQ05655 676 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 SYPL1Q16563 259 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 SPATC1Q76KD6 591 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 KRT78Q8N1N4 520 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 FAM46DQ8NEK8 389 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 TFGQ92734 400 aaPredicted RBP12.93□□□□□ -0.34
BCCIP-202ENST00000299130 UBE2E3Q969T4 207 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 TRMT61AQ96FX7 289 aaKnown RBP12.93□□□□□ -0.34
BCCIP-202ENST00000299130 ABHD8Q96I13 439 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 SLC6A18Q96N87 628 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 PRAP1Q96NZ9 151 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 TAPBPLQ9BX59 468 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 MS4A8Q9BY19 250 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 UCK2Q9BZX2 261 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 HHATLQ9HCP6 504 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 A4GALTQ9NPC4 353 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 CNOT2Q9NZN8 540 aaKnown RBP12.93□□□□□ -0.34
BCCIP-202ENST00000299130 UGT2A1Q9Y4X1 527 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 NUP210Q8TEM1 1887 aaPredicted RBP12.93□□□□□ -0.34
BCCIP-202ENST00000299130 COL4A3Q01955 1670 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 ISPDA4D126 451 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 SH3D21A4FU49 640 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 CARNS1A5YM72 827 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 ARRDC5A6NEK1 342 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 WWP2O00308 870 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 OSMP13725 252 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 CD72P21854 359 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 MAGEA8P43361 318 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 GJA8P48165 433 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 PCBP4P57723 403 aaKnown RBP12.93□□□□□ -0.34
BCCIP-202ENST00000299130 HTRA3P83110 453 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 ARHGEF6Q15052 776 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 DESI1Q6ICB0 168 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 PAQR6Q6TCH4 344 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 UBE3DQ7Z6J8 389 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 PDZD3Q86UT5 571 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 IQCF1Q8N6M8 205 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 OR5D16Q8NGK9 328 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 OR5P2Q8WZ92 322 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 RAD51AP1Q96B01 352 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 OTUB2Q96DC9 234 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 CNPPD1Q9BV87 410 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 CPNE5Q9HCH3 593 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 FZD3Q9NPG1 666 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 TSC22D4Q9Y3Q8 395 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 PCDHGB6Q9Y5F9 930 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 IRAK3Q9Y616 596 aa12.93□□□□□ -0.34
BCCIP-202ENST00000299130 CHD7Q9P2D1 2997 aa12.92□□□□□ -0.34
BCCIP-202ENST00000299130 CCRL2O00421 344 aa12.92□□□□□ -0.34
BCCIP-202ENST00000299130 HAT1O14929 419 aa12.92□□□□□ -0.34
BCCIP-202ENST00000299130 KMOO15229 486 aa12.92□□□□□ -0.34
BCCIP-202ENST00000299130 SH3BP5O60239 455 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms