RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 GNRHRP30968 328 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GSTM4Q03013 218 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR10K2Q6IF99 312 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ETFRF1Q6IPR1 90 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 UNC5AQ6ZN44 842 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 USP17L1Q7RTZ2 530 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TFAP2DQ7Z6R9 452 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM185AQ8NFB2 350 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GRIN3AQ8TCU5 1115 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 BPIFA2Q96DR5 249 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ABCC13Q9NSE7 274 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 HPGDSO60760 199 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ESR1P03372 595 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FGF7P21781 194 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MMP8P22894 467 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 PRPH2P23942 346 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GPR19Q15760 415 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GTDC1Q4AE62 458 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 KDELC1Q6UW63 502 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ABHD11Q8NFV4 315 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TRIB3Q96RU7 358 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 B3GNT4Q9C0J1 378 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SALL1Q9NSC2 1324 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZMPSTE24O75844 475 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 NUDT14O95848 222 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GSRP00390 522 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CNR1P21554 472 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR1E1P30953 314 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 BCAMP50895 628 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF630Q2M218 657 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 XKR6Q5GH73 641 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LRRC73Q5JTD7 316 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 UBE2NLQ5JXB2 153 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MLIPQ5VWP3 458 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 C16orf59Q7L2K0 433 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MCEMP1Q8IX19 187 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CRYBG2Q8N1P7 616 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GAB3Q8WWW8 586 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TAPBPLQ9BX59 468 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MROQ9BYG7 248 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SLC28A3Q9HAS3 691 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SIRPGQ9P1W8 387 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 HIF3AQ9Y2N7 669 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 VWDEQ8N2E2 1590 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FAM86B1E9PN63 330 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 M0R3H8 397 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 PHOX2AO14813 284 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TXNL1O43396 289 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 DLDP09622 509 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FAM86B2P0C5J1 330 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TBPP20226 339 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FECHP22830 423 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ADORA2AP29274 412 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 DDOSTP39656 456 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MDH2P40926 338 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MELKQ14680 651 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LCN8Q6JVE9 175 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 VTCN1Q7Z7D3 282 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 C17orf64Q86WR6 236 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FAM86B1Q8N7N1 296 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR7D4Q8NG98 312 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR4L1Q8NH43 312 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TTC9Q92623 222 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TLE6Q9H808 572 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ITGB4P16144 1822 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 A0A1W2PRB8 838 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ANXA7P20073 488 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CCR10P46092 362 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CCR4P51679 360 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MAT1AQ00266 395 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SIRT2Q8IXJ6 389 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CYP2W1Q8TAV3 490 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SLC2A14Q8TDB8 520 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ADAMTS15Q8TE58 950 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LRTOMTQ8WZ04 291 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 NINJ1Q92982 152 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RBPMSQ93062 196 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 NTAN1Q96AB6 310 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FOXRED1Q96CU9 486 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TP63Q9H3D4 680 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 RYDENQ9NUL5 291 aaKnown RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TMLHEQ9NVH6 421 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 DZANK1Q9NVP4 752 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 POLHQ9Y253 713 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 KLK4Q9Y5K2 254 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CCDC168Q8NDH2 2452 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 IQCMA0A1B0GVH7 501 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 MFSD11O43934 449 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR2F2O95006 317 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CDRT1O95170 752 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 GBE1Q04446 702 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR2F1Q13607 317 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 DSC3Q14574 896 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 FBXO48Q5FWF7 155 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 OR52E8Q6IFG1 317 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF546Q86UE3 836 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LRRC56Q8IYG6 542 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 TNS4Q8IZW8 715 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 NLGN2Q8NFZ4 835 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms