RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TBC1D1Q86TI0 1168 aaPredicted RBP18.14■□□□□ 0.49
CXCL3-201ENST00000296026 CDH24Q86UP0 819 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 FAM109AQ8N4B1 249 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 TMEM251Q8N6I4 163 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 C7orf57Q8NEG2 295 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 SPATA4Q8NEY3 305 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 OR5M9Q8NGP3 310 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 UBTD2Q8WUN7 234 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 SENP5Q96HI0 755 aaPredicted RBP18.14■□□□□ 0.49
CXCL3-201ENST00000296026 DGAT2Q96PD7 388 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 OR51B5Q9H339 312 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 HCFC1P51610 2035 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 ZNF407Q9C0G0 2248 aa18.14■□□□□ 0.49
CXCL3-201ENST00000296026 BCKDKO14874 412 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 KERAO60938 352 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 LTA4HP09960 611 aaKnown RBP18.13■□□□□ 0.49
CXCL3-201ENST00000296026 EPB42P16452 691 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 STT3AP46977 705 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 PCDH1Q08174 1060 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 DDX39BQ13838 428 aaKnown RBP18.13■□□□□ 0.49
CXCL3-201ENST00000296026 MPEG1Q2M385 716 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 PIGGQ5H8A4 983 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 ZNF585AQ6P3V2 769 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 TRILQ7L0X0 811 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 CCDC25Q86WR0 208 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 RNF175Q8N4F7 328 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 PPWD1Q96BP3 646 aaKnown RBP18.13■□□□□ 0.49
CXCL3-201ENST00000296026 RPF2Q9H7B2 306 aaKnown RBP18.13■□□□□ 0.49
CXCL3-201ENST00000296026 IGSF5Q9NSI5 407 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 MS4A12Q9NXJ0 267 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 TUBA8Q9NY65 449 aaPredicted RBP18.13■□□□□ 0.49
CXCL3-201ENST00000296026 PYCARDQ9ULZ3 195 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 TACC2O95359 2948 aa18.13■□□□□ 0.49
CXCL3-201ENST00000296026 PHF3Q92576 2039 aaKnown RBP18.13■□□□□ 0.49
CXCL3-201ENST00000296026 A0A1B0GVC2 190 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 ATP6AP2A0A1C7CYW4 349 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 FIGNL2A6NMB9 653 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 FOXO6A8MYZ6 492 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 ATP6AP2O75787 350 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 CELA3AP09093 270 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 ACVR2AP27037 513 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 MSX1P28360 303 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 CRABP2P29373 138 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 RAP1GDS1P52306 607 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 PLTPP55058 493 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 C2orf54Q08AI8 447 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 FOXO1Q12778 655 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 HYAL4Q2M3T9 481 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 GRHL2Q6ISB3 625 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 DGAT2L6Q6ZPD8 337 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 C9orf40Q8IXQ3 194 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 TEX9Q8N6V9 391 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 OR10Q1Q8NGQ4 319 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 HUS1BQ8NHY5 278 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 NUBPLQ8TB37 319 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 RGMAQ96B86 450 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 NXNL1Q96CM4 212 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 RBM18Q96H35 190 aaKnown RBP18.12■□□□□ 0.49
CXCL3-201ENST00000296026 SEMA4BQ9NPR2 832 aaPredicted RBP18.12■□□□□ 0.49
CXCL3-201ENST00000296026 TNFRSF10DQ9UBN6 386 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 ADGRE2Q9UHX3 823 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 ATG4BQ9Y4P1 393 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 POLQO75417 2590 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 ADGRG4Q8IZF6 3080 aa18.12■□□□□ 0.49
CXCL3-201ENST00000296026 HRKO00198 91 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 DYRK3O43781 588 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 IGKV3-11P04433 115 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 MTHFD2P13995 350 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 PIGAP37287 484 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 MAGEA4P43358 317 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 MAN2A2P49641 1150 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 PLIN5Q00G26 463 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 TNFRSF17Q02223 184 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 FOLH1Q04609 750 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 BIKQ13323 160 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 SLC10A1Q14973 349 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 TESK1Q15569 626 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 ZNF791Q3KP31 576 aaPredicted RBP18.11■□□□□ 0.49
CXCL3-201ENST00000296026 C18orf63Q68DL7 685 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 GPR180Q86V85 440 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 MYLK4Q86YV6 388 aaPredicted RBP18.11■□□□□ 0.49
CXCL3-201ENST00000296026 DMRTC2Q8IXT2 367 aaPredicted RBP18.11■□□□□ 0.49
CXCL3-201ENST00000296026 SLC22A8Q8TCC7 542 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 FBF1Q8TES7 1133 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 TANKQ92844 425 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 MTERF1Q99551 399 aaKnown RBP18.11■□□□□ 0.49
CXCL3-201ENST00000296026 CENPKQ9BS16 269 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 TTYH2Q9BSA4 534 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 LDAHQ9H6V9 325 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 PHF11Q9UIL8 331 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 ACAD8Q9UKU7 415 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 ACOT9Q9Y305 439 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 UTP11Q9Y3A2 253 aaKnown RBP18.11■□□□□ 0.49
CXCL3-201ENST00000296026 ANGPTL3Q9Y5C1 460 aa18.11■□□□□ 0.49
CXCL3-201ENST00000296026 F8P00451 2351 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 PLPP1O14494 284 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 AQP7O14520 342 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 SUSD5O60279 629 aa18.1■□□□□ 0.49
CXCL3-201ENST00000296026 PRKRAO75569 313 aaKnown RBP18.1■□□□□ 0.49
CXCL3-201ENST00000296026 TLX1P31314 330 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms