RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 STARP49675 285 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 DUSP6Q16828 381 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 DIO2Q92813 273 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 CCL26Q9Y258 94 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 COL18A1P39060 1754 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 TAS2R38P59533 333 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR4N5Q8IXE1 308 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 TTYH1Q9H313 450 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 AMBNQ9NP70 447 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 A0A075B6Q4 140 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 MYOCOSA0A1B0GUC4 107 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 PLOD3O60568 738 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 AK4P27144 223 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZNF140P52738 457 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 VMACQ2NL98 169 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 QSOX2Q6ZRP7 698 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 CARM1Q86X55 608 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 YIPF7Q8N8F6 280 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 L3HYPDHQ96EM0 354 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 SYT11Q9BT88 431 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 POLDIP3Q9BY77 421 aaKnown RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 UBE2ZQ9H832 354 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 ABCB9Q9NP78 766 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 LHX3Q9UBR4 397 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 DHFRP00374 187 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 F3P13726 295 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 GPR143P51810 404 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 RAET1LQ5VY80 246 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 CCDC54Q8NEL0 328 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 GNPDA2Q8TDQ7 276 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 ASB15Q8WXK1 588 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 CPNE2Q96FN4 548 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 CPNE7Q9UBL6 633 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 GATBO75879 557 aaKnown RBP16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 IVDP26440 423 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 BCAP31P51572 246 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 EMP2P54851 167 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR2A12Q8NGT7 310 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 ARRDC2Q8TBH0 407 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 SETD6Q8TBK2 473 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 RHBDF1Q96CC6 855 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 PRSS16Q9NQE7 514 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 PSIP1O75475 530 aaKnown RBP16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 CCNOP22674 350 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 FAM189A2Q15884 450 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 UGT3A2Q3SY77 523 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 LHX8Q68G74 356 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 PITHD1Q9GZP4 211 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 HOXD1Q9GZZ0 328 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 LRIT1Q9P2V4 623 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 CH25HO95992 272 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 RPLP0P05388 317 aaKnown RBP16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 TSPAN5P62079 268 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 MRPL49Q13405 166 aaKnown RBP16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 CDHR3Q6ZTQ4 885 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 COMMD6Q7Z4G1 85 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 STX12Q86Y82 276 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 PIANPQ8IYJ0 282 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 ANKFN1Q8N957 763 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR52E1Q8NGJ3 308 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 THEM6Q8WUY1 208 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 ATOH1Q92858 354 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 SLC22A12Q96S37 553 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 NAA11Q9BSU3 229 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 UPB1Q9UBR1 384 aa16.92■□□□□ 0.3
CDC42EP3-201ENST00000295324 TBX1O43435 398 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 PRAMEF2O60811 474 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 MAGP20916 626 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 CDH11P55287 796 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR52P1PQ8NH57 321 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 NKD1Q969G9 470 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 BMFQ96LC9 184 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR1F2PQ96R84 312 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 ORAI3Q9BRQ5 295 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 RDH14Q9HBH5 336 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 CXXC1Q9P0U4 656 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 MAOBP27338 520 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZNF84P51523 738 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 LRIF1Q5T3J3 769 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 TOR1AIP2Q8NFQ8 470 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 IFT46Q9NQC8 304 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 COL22A1Q8NFW1 1626 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 MYH9P35579 1960 aaKnown RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 SCAMP2O15127 329 aaKnown RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 DIRAS1O95057 198 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 AQP4P55087 323 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 CLRN1P58418 232 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 GALNT1Q10472 559 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 CHAF1BQ13112 559 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 TMEM151BQ8IW70 566 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 MEIOBQ8N635 442 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 A8MVJ9 347 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 FAM25EA8MYX2 175 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 BRINP1O60477 761 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 NDUFAF5Q5TEU4 345 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 C16orf78Q8WTQ4 265 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZUFSPQ96AP4 578 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 AURKBQ96GD4 344 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 HS6ST2Q96MM7 605 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms