RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TBC1D3GQ6DHY5 549 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3CQ6IPX1 549 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TLDC1Q6P9B6 456 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBC1D3Q8IZP1 549 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 GHDCQ8N2G8 530 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 NFKBIDQ8NI38 313 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 RGMAQ96B86 450 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 MYOCQ99972 504 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 KCNH6Q9H252 994 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 ADAP2Q9NPF8 381 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 DNAJC27Q9NZQ0 273 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 SCP2D1Q9UJQ7 156 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 ERVW-1Q9UQF0 538 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 PCDHGB5Q9Y5G0 923 aa11.36□□□□□ -0.59
SYNGAP1-201ENST00000293748 FUOMA2VDF0 154 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 A8MV72 311 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CAPN5O15484 640 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 FLRT2O43155 660 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 GADD45AP24522 165 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 GGT5P36269 586 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 PUM1Q14671 1186 aaKnown RBP eCLIP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 KLHL26Q53HC5 615 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CEACAM20Q6UY09 585 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CDHR3Q6ZTQ4 885 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 TMEM150AQ86TG1 271 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 OR2L2Q8NH16 312 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 COQ8BQ96D53 544 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 FAM83CQ9BQN1 747 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 FOLH1BQ9HBA9 442 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 SMOXQ9NWM0 555 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 EXTL2Q9UBQ6 330 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 PCDHGB2Q9Y5G2 931 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 M0R036 132 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 B3GALT2O43825 422 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CNTN5O94779 1100 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 EPOP01588 193 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 VAMP1P23763 118 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CCR8P51685 355 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 DIO3P55073 304 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CASP9P55211 416 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 USF2Q15853 346 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 ABCA11PQ4W5N1 156 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 C2orf27AQ580R0 203 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF767PQ75MW2 155 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 UBQLNLQ8IYU4 475 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 OR5J2Q8NH18 312 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 KCNJ9Q92806 393 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 NXPE2Q96DL1 559 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 PGAP3Q96FM1 320 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 SCRN2Q96FV2 425 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 MGLLQ99685 303 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 COL25A1Q9BXS0 654 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 PLA2G2FQ9BZM2 168 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 B3GNT4Q9C0J1 378 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 FBRSQ9HAH7 460 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 EVA1BQ9NVM1 165 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CUEDC1Q9NWM3 386 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 LRRC72A6NJI9 287 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 KBTBD6Q86V97 674 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 RPLP0P6Q8NHW5 317 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 C1orf74Q96LT6 269 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZSCAN5AQ9BUG6 496 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 FUNDC2Q9BWH2 189 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 METTL8Q9H825 291 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 ERVK-18Q9QC07 812 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 EBF1Q9UH73 591 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 PRR33A8MZF0 331 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 UBXN7O94888 489 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 TGFB1P01137 390 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 BMP2P12643 396 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CLCN7P51798 805 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 VAMP2P63027 116 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 REEP3Q6NUK4 255 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF227Q86WZ6 799 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 TMEM25Q86YD3 366 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 OR5AK3PQ8NH89 298 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 OSTF1Q92882 214 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 CD180Q99467 661 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 POLE4Q9NR33 117 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC22A14Q9Y267 594 aa11.35□□□□□ -0.59
SYNGAP1-201ENST00000293748 A0A096LPI6 279 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 J3QLW9 94 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PRKYO43930 277 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF19P17023 458 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 LHCGRP22888 699 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 CD40LGP29965 261 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 CTBP2P56545 445 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 RELAQ04206 551 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 CNIH3Q8TBE1 160 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 RIT1Q92963 219 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 LMLNQ96KR4 655 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 WRAP53Q9BUR4 548 aaKnown RBP11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 MEAF6Q9HAF1 191 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 CHMP1AQ9HD42 196 aaPredicted RBP11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 ABCB8Q9NUT2 735 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 CDC14AQ9UNH5 594 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PDCD11Q14690 1871 aaKnown RBP11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 CLCA1A8K7I4 914 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms