RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 BMPR1AP36894 532 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 ANKDD1AQ495B1 522 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 RAB41Q5JT25 222 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 MPP7Q5T2T1 576 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 CPXM2Q8N436 756 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 OR56A3Q8NH54 315 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 OR52P1PQ8NH57 321 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 LRRN3Q9H3W5 708 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 IL17CQ9P0M4 197 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 HSFX1Q9UBD0 423 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 RBMX2Q9Y388 322 aaKnown RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 TMEM14AQ9Y6G1 99 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 GLOD5A6NK44 160 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 TGM5O43548 720 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 PLGP00747 810 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 ADAP00813 363 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 GABRA3P34903 492 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 VSX2P58304 361 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 CLLU1OSQ5K130 101 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 SLC44A3Q8N4M1 653 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 JAGN1Q8N5M9 183 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 METTL25Q8N6Q8 603 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 NECTIN4Q96NY8 510 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 BARD1Q99728 777 aaKnown RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 PITHD1Q9GZP4 211 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 SEC61A2Q9H9S3 476 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 SLCO3A1Q9UIG8 710 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 GMEB1Q9Y692 573 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 MAU2Q9Y6X3 613 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 MYH13Q9UKX3 1938 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 HEXBP07686 556 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 GSTT2P0CG29 244 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 RUNX3Q13761 415 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 LAPTM4AQ15012 233 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CST6Q15828 149 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF648Q5T619 568 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 THOC7Q6I9Y2 204 aaKnown RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CHIAQ9BZP6 476 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 GSTO2Q9H4Y5 243 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ARNT2Q9HBZ2 717 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 FKBP14Q9NWM8 211 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 DNMT3AQ9Y6K1 912 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 MYH8P13535 1937 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 TP53I11O14683 189 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 PORP16435 677 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 TYRP1P17643 537 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CD70P32970 193 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CTC1Q2NKJ3 1217 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 MLIPQ5VWP3 458 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 GLT8D1Q68CQ7 371 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ALKBH2Q6NS38 261 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 TSPYL5Q86VY4 417 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CNTN4Q8IWV2 1026 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CNIH3Q8TBE1 160 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 MMABQ96EY8 250 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 F2RL3Q96RI0 385 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 DPH7Q9BTV6 452 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 BTNL2Q9UIR0 455 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 KLHL21Q9UJP4 597 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 NUP98P52948 1817 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 OR6C70A6NIJ9 312 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 SLC22A31A6NKX4 558 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 K7ERQ8 282 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 PRKYO43930 277 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF182P17025 639 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 RAB28P51157 221 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 MAZP56270 477 aaKnown RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 TAS2R38P59533 333 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 RUNDC3AQ59EK9 446 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 XKRXQ6PP77 449 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CD200R1Q8TD46 325 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 C16orf78Q8WTQ4 265 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF559Q9BR84 538 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ENAMQ9NRM1 1142 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ASB6Q9NWX5 421 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 PCDHGA7Q9Y5G6 932 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 PTGDR2Q9Y5Y4 395 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 OR6C74A6NCV1 312 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 OR2AT4A6NND4 320 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 LDB2O43679 373 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CSTAP01040 98 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 MAD2L1BPQ15013 274 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CES4AQ5XG92 561 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 OR6N1Q8NGY5 312 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 SNIP1Q8TAD8 396 aaKnown RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 DAZLQ92904 295 aaKnown RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 RHBDF1Q96CC6 855 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 OR8D2Q9GZM6 311 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 PDE7BQ9NP56 450 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 TAS2R10Q9NYW0 307 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 RABL2AQ9UBK7 228 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 RABL2BQ9UNT1 228 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 MYH11P35749 1972 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 TCRBV21S2A2A0A5A6 115 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 GRXCR1A8MXD5 290 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 J3QRK9 145 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 KHNYNO15037 678 aaKnown RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 VILLO15195 856 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms