RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TOR1AIP1Q5JTV8 583 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 PGM2L1Q6PCE3 622 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 FRRS1Q6ZNA5 592 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 ZNF367Q7RTV3 350 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 FAM129CQ86XR2 697 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 OR6Q1Q8NGQ2 317 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 CLIP3Q96DZ5 547 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 TMEM80Q96HE8 168 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 MYADMQ96S97 322 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 EXO5Q9H790 373 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 FZD4Q9ULV1 537 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 ZNF780BQ9Y6R6 833 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 ATAD5Q96QE3 1844 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 KIF13BQ9NQT8 1826 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 A0A075B6Q4 140 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 FAM221BA6H8Z2 402 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 C2CD4DB7Z1M9 353 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 BHMG1C9JSJ3 638 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 TMX2-CTNND1H3BSU7 103 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 DUX1O43812 170 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 CACNG3O60359 315 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 PRH1P02810 166 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 C6P13671 934 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 HSD17B1P14061 328 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 PVALBP20472 110 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 DNAJB1P25685 340 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 DCKP27707 260 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 RBMS1P29558 406 aaKnown RBP10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 GKP32189 559 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 HNF1BP35680 557 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 RGS8P57771 180 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 ADAM8P78325 824 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 FAM76BQ5HYJ3 339 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 PRAMEF17Q5VTA0 474 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 RPTNQ6XPR3 784 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 Q6ZVL8 140 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 AQP11Q8NBQ7 271 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 BCL7CQ8WUZ0 217 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 RFT1Q96AA3 541 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 VMP1Q96GC9 406 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 RNF121Q9H920 327 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 FOLH1BQ9HBA9 442 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 MRM3Q9HC36 420 aaKnown RBP10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 PCDHB16Q9NRJ7 776 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 MTMR10Q9NXD2 777 aa10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 YARS2Q9Y2Z4 477 aaKnown RBP10.9□□□□□ -0.66
NPC1L1-201ENST00000289547 TTC24A2A3L6 582 aaPredicted RBP10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 MEIOCA2RUB1 952 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 WASH4PA8MWX3 477 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 CCINQ13939 588 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF678Q5SXM1 525 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 HACD2Q6Y1H2 254 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 PSD4Q8NDX1 1056 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 RHOXF1Q8NHV9 184 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 PIGXQ8TBF5 258 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 IFT27Q9BW83 186 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 ARL6Q9H0F7 186 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 MARK1Q9P0L2 795 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 FTSJ1Q9UET6 329 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 TMEM98Q9Y2Y6 226 aa10.9□□□□□ -0.67
NPC1L1-201ENST00000289547 ENDOUP21128 410 aaKnown RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 CASP3P42574 277 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 PRRT3Q5FWE3 981 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 CLEC12AQ5QGZ9 265 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 RSPO2Q6UXX9 243 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 TICAM1Q8IUC6 712 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 RHBDD1Q8TEB9 315 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 PEX13Q92968 403 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 IMP4Q96G21 291 aaKnown RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 MGME1Q9BQP7 344 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 DUSP23Q9BVJ7 150 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 BCL2L14Q9BZR8 327 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 BRD7Q9NPI1 651 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 KCNK6Q9Y257 313 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC35F4A4IF30 521 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 C5orf51A6NDU8 294 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 CDC7O00311 574 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 PAPSS2O95340 614 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 GALEQ14376 348 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC25A25Q6KCM7 469 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 ARSKQ6UWY0 536 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 Q7L0L9 218 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 TCEANCQ8N8B7 351 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 DTX3Q8N9I9 347 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 MFSD2AQ8NA29 543 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 GON7Q9BXV9 100 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 MROQ9BYG7 248 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 EQTNQ9NQ60 294 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 NLE1Q9NVX2 485 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 CASP8AP2Q9UKL3 1982 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 PLXNB2O15031 1838 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 MBTPS2O43462 519 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 NIPSNAP2O75323 286 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 LHCGRP22888 699 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 RBM34P42696 430 aaKnown RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 PPP3R1P63098 170 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 TMEM115Q12893 351 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 SCARB2Q14108 478 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 ATXN7L3Q14CW9 347 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms