RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 GRK2P25098 689 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 TIA1P31483 386 aaKnown RBP eCLIP6.11□□□□□ -1.43
CD44-204ENST00000279452 SERPINB5P36952 375 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 CASRP41180 1078 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ETV4P43268 484 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ST13P50502 369 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 CLCN2P51788 898 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ABCE1P61221 599 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 TBL3Q12788 808 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 STX3Q13277 289 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 MFAP5Q13361 173 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 MPP2Q14168 576 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ELAVL1Q15717 326 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 NADK2Q4G0N4 442 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 AGBL2Q5U5Z8 902 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 JMJD6Q6NYC1 403 aaPredicted RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 ZNF605Q86T29 641 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 CLYBLQ8N0X4 340 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 MMP21Q8N119 569 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 TMEM132CQ8N3T6 1108 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ZNF843Q8N446 348 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 B3GNT7Q8NFL0 401 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 OR4K14Q8NGD5 310 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 OR14A16Q8NHC5 309 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 SUN3Q8TAQ9 357 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 DNAJB14Q8TBM8 379 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 M1APQ8TC57 530 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 CHTF18Q8WVB6 975 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 DAZLQ92904 295 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 UCN3Q969E3 161 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 EXOSC8Q96B26 276 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 ARL8AQ96BM9 186 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 VMP1Q96GC9 406 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 RBM18Q96H35 190 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 ATP6V1G3Q96LB4 118 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 IMMP1LQ96LU5 166 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ZNF354BQ96LW1 612 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 SMAD5Q99717 465 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 WDR77Q9BQA1 342 aaPredicted RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 TRIM4Q9C037 500 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 BRINP2Q9C0B6 783 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 LRTM1Q9HBL6 345 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ZBTB20Q9HC78 741 aaPredicted RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 MMP25Q9NPA2 562 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 GIMAP4Q9NUV9 329 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ANKRD10Q9NXR5 420 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 PLA2G3Q9NZ20 509 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 C5AR2Q9P296 337 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 MCM8Q9UJA3 840 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 UTS2RQ9UKP6 389 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ENTPD4Q9Y227 616 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 DLGAP4Q9Y2H0 992 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 TRAF6Q9Y4K3 522 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ASB4Q9Y574 426 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ZNF780BQ9Y6R6 833 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ATP6AP2A0A1C7CYW4 349 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 A0A1W2PQ72 361 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 GABRR3A8MPY1 467 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 B8ZZF3 427 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 FCHO1O14526 889 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ITM2AO43736 263 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 PEX11AO75192 247 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ATP6AP2O75787 350 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 C1QL1O75973 258 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 GPR75O95800 540 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 KITP10721 976 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 PTGER1P34995 402 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 FEN1P39748 380 aaKnown RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 STT3AP46977 705 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 SLC1A6P48664 564 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 CD97P48960 835 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ERVK-8P63133 956 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ZNF763Q0D2J5 394 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 C2orf80Q0P641 193 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 BST1Q10588 318 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ZNF267Q14586 743 aaPredicted RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 HEPACAMQ14CZ8 416 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 MEP1AQ16819 746 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ZNF750Q32MQ0 723 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ATP6AP1LQ52LC2 224 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 TNFAIP8L3Q5GJ75 292 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ACER2Q5QJU3 275 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ATG16L1Q676U5 607 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 SLC6A19Q695T7 634 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 MRM1Q6IN84 353 aaKnown RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 FAM180BQ6P0A1 224 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 SLC48A1Q6P1K1 146 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 HSDL2Q6YN16 418 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ATG14Q6ZNE5 492 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 HPS6Q86YV9 775 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 CRLF3Q8IUI8 442 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 TRIM42Q8IWZ5 723 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 GALNT12Q8IXK2 581 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 BEST3Q8N1M1 668 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 TMEM156Q8N614 296 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ZNF781Q8N8C0 355 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 C7orf57Q8NEG2 295 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 CLHC1Q8NHS4 586 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 SLC2A12Q8TD20 617 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 C16orf78Q8WTQ4 265 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms