RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 C19orf57Q0VDD7 668 aa17.77■□□□□ 0.44
SSC4D-201ENST00000275560 SDE2Q6IQ49 451 aa17.77■□□□□ 0.44
SSC4D-201ENST00000275560 OLIG3Q7RTU3 272 aa17.77■□□□□ 0.44
SSC4D-201ENST00000275560 TRIM69Q86WT6 500 aa17.77■□□□□ 0.44
SSC4D-201ENST00000275560 Q8N402 240 aa17.77■□□□□ 0.44
SSC4D-201ENST00000275560 KLF16Q9BXK1 252 aaPredicted RBP17.77■□□□□ 0.44
SSC4D-201ENST00000275560 PCDHB7Q9Y5E2 793 aa17.77■□□□□ 0.44
SSC4D-201ENST00000275560 ZNF106Q9H2Y7 1883 aaKnown RBP17.77■□□□□ 0.43
SSC4D-201ENST00000275560 ATP1B2P14415 290 aaPredicted RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 CRTC2Q53ET0 693 aaPredicted RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 LCN1P1Q5VSP4 162 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 CNIH2Q6PI25 160 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 COMMD6Q7Z4G1 85 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 PEX5LQ8IYB4 626 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 TCTE3Q8IZS6 198 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 GDPD1Q8N9F7 314 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 OR52I1Q8NGK6 324 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 NEIL2Q969S2 332 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 COQ7Q99807 217 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 MCOLN1Q9GZU1 580 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 MKRN2Q9H000 416 aaKnown RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 RC3H2Q9HBD1 1191 aaKnown RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 GOLGA4Q13439 2230 aaKnown RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 SDHBP21912 280 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 CTGFP29279 349 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 MLLT11Q13015 90 aaPredicted RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 CRB2Q5IJ48 1285 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 AMIGO1Q86WK6 493 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 FBXO22Q8NEZ5 403 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 OR4D11Q8NGI4 311 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 RAB8BQ92930 207 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 REEP4Q9H6H4 257 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 MVB12BQ9H7P6 319 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 CTPS2Q9NRF8 586 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 TMEM161AQ9NX61 479 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 STOX2Q9P2F5 926 aaPredicted RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 SERTM1A2A2V5 107 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 BCHEP06276 602 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 GSTM5P46439 218 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 PTPN5P54829 565 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 PCBP3P57721 371 aaKnown RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 C21orf58P58505 322 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 TAS2R50P59544 299 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 PCDH1Q08174 1060 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 TARDBPQ13148 414 aaKnown RBP eCLIP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 C1DQ13901 141 aaKnown RBP17.76■□□□□ 0.43
SSC4D-201ENST00000275560 NCF4Q15080 339 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 GRHL2Q6ISB3 625 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 B3GLCTQ6Y288 498 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 GDPGP1Q6ZNW5 385 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 PROKR2Q8NFJ6 384 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 GPR32P1Q8NGA4 272 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 VOPP1Q96AW1 172 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 STMN3Q9NZ72 180 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 TRPM5Q9NZQ8 1165 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 MAPRE3Q9UPY8 281 aa17.76■□□□□ 0.43
SSC4D-201ENST00000275560 ARHGEF9O43307 516 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 PLOD3O60568 738 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 CPN2P22792 545 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 ELAVL4P26378 380 aaKnown RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 SOX18P35713 384 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 ALDH9A1P49189 494 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 SNRPGP62308 76 aaKnown RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 FCHO2Q0JRZ9 810 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 HEPACAMQ14CZ8 416 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 WSCD2Q2TBF2 565 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 TRIQKQ629K1 86 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 CCDC28AQ8IWP9 274 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 NATD1Q8N6N6 113 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 DCAF4L2Q8NA75 395 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 C19orf18Q8NEA5 215 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 CLP1Q92989 425 aaKnown RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 PPCDCQ96CD2 204 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 POLR2J3Q9H1A7 115 aaKnown RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 NARFLQ9H6Q4 476 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 TRIM45Q9H8W5 580 aaPredicted RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 RPL36Q9Y3U8 105 aaKnown RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 FAM240BA0A1B0GVZ2 78 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 H0YIV9 168 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 CELF2O95319 508 aaKnown RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 EOMESO95936 686 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 IL1AP01583 271 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 HLA-DMAP28067 261 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 IL18Q14116 193 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 LRRC32Q14392 662 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 TRIM71Q2Q1W2 868 aaKnown RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 TRIM40Q6P9F5 258 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 BRAT1Q6PJG6 821 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 CAMKMTQ7Z624 323 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 CBARPQ8N350 705 aaPredicted RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 TMEM145Q8NBT3 493 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 PCNPQ8WW12 178 aaKnown RBP17.75■□□□□ 0.43
SSC4D-201ENST00000275560 MYLIPQ8WY64 445 aa17.75■□□□□ 0.43
SSC4D-201ENST00000275560 MKI67P46013 3256 aaKnown RBP17.74■□□□□ 0.43
SSC4D-201ENST00000275560 A8MVJ9 347 aa17.74■□□□□ 0.43
SSC4D-201ENST00000275560 AVPR1BP47901 424 aa17.74■□□□□ 0.43
SSC4D-201ENST00000275560 SLC9A3P48764 834 aa17.74■□□□□ 0.43
SSC4D-201ENST00000275560 TUFMP49411 452 aaKnown RBP17.74■□□□□ 0.43
SSC4D-201ENST00000275560 AP1S2P56377 157 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms