RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 YIPF3Q9GZM5 350 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 REEP1Q9H902 201 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 EVA1BQ9NVM1 165 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 ZSCAN32Q9NX65 697 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 NDUFA13Q9P0J0 144 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 HMGN4O00479 90 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 P2RX6O15547 441 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 OR6B1O95007 311 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 ZNF888P0CJ79 500 aaPredicted RBP15.73■□□□□ 0.11
CCDC40-201ENST00000269318 TNFRSF1BP20333 461 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 NTSP30990 170 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 DAPP51397 102 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 NCBP2P52298 156 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC40-201ENST00000269318 ARHGDIAP52565 204 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 CDH15P55291 814 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 BTN3A2P78410 334 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 RELAQ04206 551 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 DUSP2Q05923 314 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 KDM4DQ6B0I6 523 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 SPPL2AQ8TCT8 520 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 LZICQ8WZA0 190 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 EPYCQ99645 322 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 THSD1Q9NS62 852 aa15.73■□□□□ 0.11
CCDC40-201ENST00000269318 LYARQ9NX58 379 aaKnown RBP15.73■□□□□ 0.11
CCDC40-201ENST00000269318 THUMPD1Q9NXG2 353 aaKnown RBP15.73■□□□□ 0.11
CCDC40-201ENST00000269318 TUBA8Q9NY65 449 aaPredicted RBP15.73■□□□□ 0.11
CCDC40-201ENST00000269318 TRIOBPQ9H2D6 2365 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 C2orf74A8MZ97 194 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 SLC16A6O15403 523 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 IFNA14P01570 189 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 SLC35G6P0C7Q6 338 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 IGFBP5P24593 272 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 RXRGP48443 463 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 RAD23AP54725 363 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 C1orf61Q13536 156 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 UBXN2BQ14CS0 331 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 CEBPEQ15744 281 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 TMEM64Q6YI46 380 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 ZNF555Q8NEP9 628 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 THAP11Q96EK4 314 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 MAPKAP1Q9BPZ7 522 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 LRRC61Q9BV99 259 aa15.72■□□□□ 0.11
CCDC40-201ENST00000269318 YTHDF1Q9BYJ9 559 aaKnown RBP15.72■□□□□ 0.11
CCDC40-201ENST00000269318 PDP1Q9P0J1 537 aaPredicted RBP15.72■□□□□ 0.11
CCDC40-201ENST00000269318 MRPS17Q9Y2R5 130 aaKnown RBP15.72■□□□□ 0.11
CCDC40-201ENST00000269318 A0A0J9YVX5 310 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 PRAMEF10O60809 474 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 MITFO75030 526 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-201ENST00000269318 ERAL1O75616 437 aaKnown RBP15.71■□□□□ 0.11
CCDC40-201ENST00000269318 BMP10O95393 424 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 RECKO95980 971 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 C9P02748 559 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 BCHEP06276 602 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 ITGAMP11215 1152 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 CTSEP14091 401 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 IL9P15248 144 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 ALDH3B2P48448 385 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 BLKP51451 505 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 STARD6P59095 220 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 TP53BP2Q13625 1128 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 ZNF750Q32MQ0 723 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 THAP5Q7Z6K1 395 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 ARMC8Q8IUR7 673 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 BAHD1Q8TBE0 780 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-201ENST00000269318 KLHL6Q8WZ60 621 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 RAB8BQ92930 207 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 TMEM19Q96HH6 336 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 ZNF681Q96N22 645 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 BBS4Q96RK4 519 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 FOXQ1Q9C009 403 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 RBM38Q9H0Z9 239 aaKnown RBP15.71■□□□□ 0.11
CCDC40-201ENST00000269318 HRASLS2Q9NWW9 162 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 RAB23Q9ULC3 237 aa15.71■□□□□ 0.11
CCDC40-201ENST00000269318 COLQQ9Y215 455 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-201ENST00000269318 A0A087WXM4 84 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 LOC100130705A0A1B0GUX0 176 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 A0A1W2PS29 197 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 FAM170BA6NMN3 283 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 WNT1P04628 370 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 PAX7P23759 505 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 RRM2P31350 389 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 GPC1P35052 558 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 POLR2IP36954 125 aaKnown RBP15.71■□□□□ 0.1
CCDC40-201ENST00000269318 OR1E2P47887 323 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 CNPY1Q3B7I2 92 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 RPS26P11Q5JNZ5 115 aaPredicted RBP15.71■□□□□ 0.1
CCDC40-201ENST00000269318 FRMPD2BQ6IN97 320 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 FAHD1Q6P587 224 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 C8orf59Q8N0T1 100 aaPredicted RBP15.71■□□□□ 0.1
CCDC40-201ENST00000269318 SMYD1Q8NB12 490 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 PIK3C3Q8NEB9 887 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 ADAMTS16Q8TE57 1224 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 GEMIN6Q8WXD5 167 aaKnown RBP15.71■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF300Q96RE9 604 aaPredicted RBP15.71■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF347Q96SE7 839 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 KLHL25Q9H0H3 589 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 ZCCHC3Q9NUD5 404 aaKnown RBP15.71■□□□□ 0.1
CCDC40-201ENST00000269318 PCDHGB3Q9Y5G1 929 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 PCDHGA8Q9Y5G5 932 aa15.71■□□□□ 0.1
CCDC40-201ENST00000269318 ORC6Q9Y5N6 252 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms