RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 UBQLN2Q9UHD9 624 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 STUB1Q9UNE7 303 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 GPR52Q9Y2T5 361 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 DRGXA6NNA5 263 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 HHLA1C9JL84 531 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 LEFTY2O00292 366 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 PRMT3O60678 531 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 TRIM3O75382 744 aaPredicted RBP11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ALPPP05187 535 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 CTSEP14091 401 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ARNTP27540 789 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 RGS6P49758 472 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 SP140Q13342 867 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 NTRK2Q16620 822 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 TFGQ92734 400 aaPredicted RBP11.07□□□□□ -0.64
VPS33A-201ENST00000267199 TRIM43Q96BQ3 446 aaPredicted RBP11.07□□□□□ -0.64
VPS33A-201ENST00000267199 SLC39A13Q96H72 371 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 RETREG1Q9H6L5 497 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 TDP1Q9NUW8 608 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 MGAT4BQ9UQ53 548 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 NARSO43776 548 aaKnown RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 RPP14O95059 124 aaKnown RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 C8orf89P0DMQ9 161 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 GPR68Q15743 365 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 ANKRD34AQ69YU3 496 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 TMED4Q7Z7H5 227 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PEG10Q86TG7 708 aaKnown RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PGBD5Q8N414 524 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 KCT2Q8NC54 265 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 B3GNT7Q8NFL0 401 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 ZCCHC10Q8TBK6 192 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 NECTIN4Q96NY8 510 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 MNTQ99583 582 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 HSFX1Q9UBD0 423 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 YARS2Q9Y2Z4 477 aaKnown RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 LOC105369274A0A096LPK9 316 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PSMA6P60900 246 aaKnown RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 XKR4Q5GH76 650 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 FAM219BQ5XKK7 198 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 FAM129CQ86XR2 697 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 MFSD6LQ8IWD5 586 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 OR4N4Q8N0Y3 316 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 NAGSQ8N159 534 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 CHCHD4Q8N4Q1 142 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 KLHDC9Q8NEP7 349 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 OR14C36Q8NHC7 312 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 RHBDF1Q96CC6 855 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 CNDP2Q96KP4 475 aaKnown RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 REEP4Q9H6H4 257 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 TRIM36Q9NQ86 728 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 HPF1Q9NWY4 346 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 TAS2R16Q9NYV7 291 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 MROH6A6NGR9 719 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 MEN1O00255 615 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 SMAD6O43541 496 aaKnown RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 RASGRP1O95267 797 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 HMGN1P05114 100 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 CYBAP13498 195 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 ACP5P13686 325 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 MAT2AP31153 395 aaKnown RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 CEBPGP53567 150 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 IRF5Q13568 498 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 OXA1LQ15070 435 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PTPRRQ15256 657 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 IER5LQ5T953 404 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 LIPJQ5W064 366 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 C17orf99Q6UX52 265 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 GALNT13Q8IUC8 556 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 SLC5A11Q8WWX8 675 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 GPR78Q96P69 363 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 BTBD1Q9H0C5 482 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PHIPQ8WWQ0 1821 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 LOC100509620A0A075B734 347 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 SLC31A1O15431 190 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 LYRM1O43325 122 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PROM1O43490 865 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 MMP20O60882 483 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 LEFTY1O75610 366 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PRAMEF12O95522 483 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 JUPP14923 745 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 GSTM3P21266 225 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PIK3CBP42338 1070 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 CLCNKAP51800 687 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 KEAP1Q14145 624 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 ODF4Q2M2E3 257 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF791Q3KP31 576 aaPredicted RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 SLC25A24Q6NUK1 477 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 KLBQ86Z14 1044 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 GJD3Q8N144 294 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 GTF2H4Q92759 462 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 HYLS1Q96M11 299 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF583Q96ND8 569 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 CACNG6Q9BXT2 260 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 BHLHE41Q9C0J9 482 aaPredicted RBP11.06□□□□□ -0.64
VPS33A-201ENST00000267199 SLA2Q9H6Q3 261 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 IL20RAQ9UHF4 553 aa11.06□□□□□ -0.64
VPS33A-201ENST00000267199 PCDH17O14917 1159 aa11.05□□□□□ -0.64
VPS33A-201ENST00000267199 TGFBR1P36897 503 aa11.05□□□□□ -0.64
VPS33A-201ENST00000267199 KHKP50053 298 aa11.05□□□□□ -0.64
VPS33A-201ENST00000267199 CCR8P51685 355 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms