RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PKMYT1Q99640 499 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 CDCA4Q9BXL8 241 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ULBP1Q9BZM6 244 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ACTR6Q9GZN1 396 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ACTR10Q9NZ32 417 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 MAPRE3Q9UPY8 281 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 CCL27Q9Y4X3 112 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 MAB21L2Q9Y586 359 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 GABRR3A8MPY1 467 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 J3KTA2 159 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ENTPD6O75354 484 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 KDM4BO94953 1096 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 FABP1P07148 127 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ACAA1P09110 424 aaPredicted RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 ITGB7P26010 798 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 OR1E2P47887 323 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 KCNJ3P48549 501 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 HNMTP50135 292 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 CASP9P55211 416 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 AP1S2P56377 157 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 RPS7P62081 194 aaKnown RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 SCRN3Q0VDG4 424 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 PLA1AQ53H76 456 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 INO80DQ53TQ3 878 aaPredicted RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 DDI2Q5TDH0 399 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 GPR65Q8IYL9 337 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ZFP41Q8N8Y5 198 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 OR4F6Q8NGB9 312 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 OR4D10Q8NGI6 311 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 METTL6Q8TCB7 284 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 EDARADDQ8WWZ3 215 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 GTPBP3Q969Y2 492 aaKnown RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 PCED1BQ96HM7 432 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 C7orf34Q96L11 122 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 SFXN2Q96NB2 322 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 DLL4Q9NR61 685 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 DNAJC27Q9NZQ0 273 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 SH3BP4Q9P0V3 963 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 EDARQ9UNE0 448 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 SLC9A8Q9Y2E8 581 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 NINQ8N4C6 2090 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 STMND1H3BQB6 276 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 PDCD5O14737 125 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 INPPL1O15357 1258 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 YKT6O15498 198 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 RNF224P0DH78 156 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 CXCL2P19875 107 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 DNASE1P24855 282 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 CLDN8P56748 225 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 RPS25P62851 125 aaKnown RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 S100A12P80511 92 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 TIMM50Q3ZCQ8 353 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ALFQ53S48 1182 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 PLAG1Q6DJT9 500 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ALG1LQ6GMV1 187 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 OVOS1Q6IE37 1185 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 MZT2BQ6NZ67 158 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 GPRIN1Q7Z2K8 1008 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ZFP82Q8N141 532 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 FTMTQ8N4E7 242 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 WNT2BQ93097 391 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 MAL2Q969L2 176 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 CIDECQ96AQ7 238 aaPredicted RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 NXPE2Q96DL1 559 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 SLC6A18Q96N87 628 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 SEPT5Q99719 369 aaPredicted RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 ADAT1Q9BUB4 502 aaKnown RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 PRR14Q9BWN1 585 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 SAP130Q9H0E3 1048 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 STUB1Q9UNE7 303 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 STON1Q9Y6Q2 735 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 PRAMEF25A6NGN4 478 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 J3KR12 359 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 M0R233 179 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 BTN3A1O00481 513 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 TO15178 435 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 B4GALT3O60512 393 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 KERAO60938 352 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 EIF3GO75821 320 aaKnown RBP eCLIP8.36□□□□□ -1.07
VAPB-201ENST00000265619 LRATO95237 230 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 SLC2A3P11169 496 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ATP5A1P25705 553 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 SLC6A1P30531 599 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 GPR15P49685 360 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 WNT3AP56704 352 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 ST3GAL2Q16842 350 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 UAP1L1Q3KQV9 507 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 RNASE12Q5GAN4 147 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 MPP7Q5T2T1 576 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 UNC93AQ86WB7 457 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 WDR20Q8TBZ3 569 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 TM9SF4Q92544 642 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 NT5C3BQ969T7 300 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 MRPS24Q96EL2 167 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 SPSB2Q99619 263 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 EVA1AQ9H8M9 152 aa8.36□□□□□ -1.07
VAPB-201ENST00000265619 FNDC3AQ9Y2H6 1198 aaKnown RBP8.36□□□□□ -1.07
VAPB-201ENST00000265619 Q9Y3F1 56 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms