RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PRTFDC1Q9NRG1 225 aa13.4□□□□□ -0.26
SSBP1-201ENST00000265304 C3orf18Q9UK00 162 aa13.4□□□□□ -0.26
SSBP1-201ENST00000265304 MKL2Q9ULH7 1088 aa13.4□□□□□ -0.26
SSBP1-201ENST00000265304 CFAP47Q6ZTR5 3102 aa13.4□□□□□ -0.26
SSBP1-201ENST00000265304 LOC400499M0QZD8 3231 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 GOLGA8QA0A0J9YX86 632 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 GOLGA8OA6NCC3 632 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 GOLGA8NF8WBI6 632 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 SNX3O60493 162 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 ALOX12BO75342 701 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 WT1P19544 449 aaPredicted RBP13.39□□□□□ -0.27
SSBP1-201ENST00000265304 RPL3P39023 403 aaKnown RBP13.39□□□□□ -0.27
SSBP1-201ENST00000265304 GNGT1P63211 74 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 TLE3Q04726 772 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 SERTAD2Q14140 314 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 PTGR1Q14914 329 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 PDCD4Q53EL6 469 aaKnown RBP13.39□□□□□ -0.27
SSBP1-201ENST00000265304 KIRREL2Q6UWL6 708 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 PPP1R32Q7Z5V6 425 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 MTERF4Q7Z6M4 381 aaKnown RBP13.39□□□□□ -0.27
SSBP1-201ENST00000265304 TMEM132CQ8N3T6 1108 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 LIX1Q8N485 282 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 NATD1Q8N6N6 113 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 C10orf82Q8WW14 230 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 UCN3Q969E3 161 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 TESCQ96BS2 214 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 PPP1R36Q96LQ0 422 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 CRB3Q9BUF7 120 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 EBPLQ9BY08 206 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 REEP4Q9H6H4 257 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 NECTIN3Q9NQS3 549 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 BAIAP2L1Q9UHR4 511 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 PSME2Q9UL46 239 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 HS3ST3B1Q9Y662 390 aa13.39□□□□□ -0.27
SSBP1-201ENST00000265304 WASHC1A8K0Z3 465 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 GABRR3A8MPY1 467 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 MYO1GB0I1T2 1018 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 SOCS6O14544 535 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 UBDO15205 165 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 RRP8O43159 456 aaKnown RBP13.38□□□□□ -0.27
SSBP1-201ENST00000265304 KLK10O43240 276 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 FGF17O60258 216 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 B4GALT2O60909 372 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 SLC35E2P0CK97 266 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 C2orf80Q0P641 193 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 IL10RAQ13651 578 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 PRSS53Q2L4Q9 553 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 R3HCC1LQ7Z5L2 792 aaKnown RBP13.38□□□□□ -0.27
SSBP1-201ENST00000265304 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
SSBP1-201ENST00000265304 EFCAB3Q8N7B9 438 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 FAM47BQ8NA70 645 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 GLB1L3Q8NCI6 653 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-201ENST00000265304 OR4K14Q8NGD5 310 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 OR8J2Q8NGG1 315 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 STARD8Q92502 1023 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 IMMP1LQ96LU5 166 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 PTCHD1Q96NR3 888 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 WDR77Q9BQA1 342 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-201ENST00000265304 C1orf50Q9BV19 199 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 ZNF700Q9H0M5 742 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-201ENST00000265304 SLC35C2Q9NQQ7 365 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 MRGBPQ9NV56 204 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 ZIM2Q9NZV7 527 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 DCTN4Q9UJW0 460 aa13.38□□□□□ -0.27
SSBP1-201ENST00000265304 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
SSBP1-201ENST00000265304 OR2W5A6NFC9 320 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 ZNF891A8MT65 544 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 SCAMP2O15127 329 aaKnown RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 SCN2BO60939 215 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 ATP1B1P05026 303 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 HEXBP07686 556 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 C8orf89P0DMQ9 161 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 MAOAP21397 527 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 GPX3P22352 226 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 ADSLP30566 484 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 SOX18P35713 384 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 STT3AP46977 705 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 ZFP36L2P47974 494 aaKnown RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 GPR143P51810 404 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 ARFIP2P53365 341 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 UCNP55089 124 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 SOX8P57073 446 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 FOXL2P58012 376 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 RPS18P62269 152 aaKnown RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 FOLH1Q04609 750 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 MLC1Q15049 377 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 NSDHLQ15738 373 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 MPEG1Q2M385 716 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 DPY19L1Q2PZI1 675 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 TMEM198Q66K66 360 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 ANKRD37Q7Z713 158 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 VASH2Q86V25 355 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 ST13P4Q8IZP2 240 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 MMP21Q8N119 569 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 OR11G2Q8NGC1 345 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 THAP4Q8WY91 577 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 CTHRC1Q96CG8 243 aa13.37□□□□□ -0.27
SSBP1-201ENST00000265304 CNRIP1Q96F85 164 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-201ENST00000265304 TSSK3Q96PN8 268 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms