RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CST6Q15828 149 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 PNCKQ6P2M8 343 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 FAM92BQ6ZTR7 304 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 PTCHD4Q6ZW05 846 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 C12orf40Q86WS4 652 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 METTL4Q8N3J2 472 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 ZFP90Q8TF47 636 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 SLC35G5Q96KT7 338 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 LHPPQ9H008 270 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 RBM38Q9H0Z9 239 aaKnown RBP15.55■□□□□ 0.08
CTCF-201ENST00000264010 FBXL12Q9NXK8 326 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 COLEC10Q9Y6Z7 277 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 LAMA2P24043 3122 aaKnown RBP15.55■□□□□ 0.08
CTCF-201ENST00000264010 SLC31A1O15431 190 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 ZW10O43264 779 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 CISD3P0C7P0 127 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 POU2F1P14859 743 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 CD22P20273 847 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 CMPK1P30085 196 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 MAT2AP31153 395 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 MXD1Q05195 221 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.54■□□□□ 0.08
CTCF-201ENST00000264010 KEAP1Q14145 624 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 ARHGAP19Q14CB8 494 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 ITPRIPL2Q3MIP1 535 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 PXDC1Q5TGL8 231 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 KHDRBS2Q5VWX1 349 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 CIDECQ96AQ7 238 aaPredicted RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 TRNT1Q96Q11 434 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 CARS2Q9HA77 564 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 STON1Q9Y6Q2 735 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 A0A1W2PP55 124 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 ISPDA4D126 451 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 RTCAO00442 366 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 P2RY2P41231 377 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 HBA1P69905 142 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 ZNF544Q6NX49 715 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 USP51Q70EK9 711 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 FCGR1BQ92637 280 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 ZNF486Q96H40 463 aaPredicted RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 ERVK-18Q9QC07 812 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 BAIAP2Q9UQB8 552 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 NDUFS4O43181 175 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 BCHEP06276 602 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 HTR1BP28222 390 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 POLR2IP36954 125 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 VLDLRP98155 873 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 GANABQ14697 944 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 TCEA2Q15560 299 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 PRSS36Q5K4E3 855 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 DCST1Q5T197 706 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 PCNPQ8WW12 178 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 Q96MT0 163 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 TRMT61BQ9BVS5 477 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 C14orf119Q9NWQ9 140 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 MALT1Q9UDY8 824 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 YARS2Q9Y2Z4 477 aaKnown RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 DNMT3AQ9Y6K1 912 aaPredicted RBP15.54■□□□□ 0.08
CTCF-201ENST00000264010 SPACA6W5XKT8 324 aa15.54■□□□□ 0.08
CTCF-201ENST00000264010 TRBV5-3A0A0A0MS03 114 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 DCKP27707 260 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 UQCRC1P31930 480 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 CDK3Q00526 305 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 KCNC4Q03721 635 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 DPTQ07507 201 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 TBRG1Q3YBR2 411 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 GPAT3Q53EU6 434 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 PYDC2Q56P42 97 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 Q6ZNX1 250 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 FAM124AQ86V42 546 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 TIGD4Q8IY51 512 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 EPYCQ99645 322 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 FNDC11Q9BVV2 318 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 ZCCHC3Q9NUD5 404 aaKnown RBP15.53■□□□□ 0.08
CTCF-201ENST00000264010 FNDC1Q4ZHG4 1894 aaPredicted RBP15.53■□□□□ 0.08
CTCF-201ENST00000264010 NPIPB8E9PQR5 432 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 SLC22A1O15245 554 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 SLC16A6O15403 523 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 PRSS23O95084 383 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 PIGAP37287 484 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 NFATC3Q12968 1075 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 TYW3Q6IPR3 259 aaKnown RBP15.53■□□□□ 0.08
CTCF-201ENST00000264010 KIAA1324Q6UXG2 1013 aaKnown RBP15.53■□□□□ 0.08
CTCF-201ENST00000264010 HERVK_113Q902F9 699 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 ASB16Q96NS5 453 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 AMBRA1Q9C0C7 1298 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 KLHL18O94889 574 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 C5AR1P21730 350 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 HNRNPFP52597 415 aaKnown RBP15.53■□□□□ 0.08
CTCF-201ENST00000264010 RGS1Q08116 209 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 C2orf27AQ580R0 203 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 OR7G1Q8NGA0 311 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 COQ8BQ96D53 544 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 FEVQ99581 238 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 SLC28A3Q9HAS3 691 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 C3orf14Q9HBI5 128 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 HCN4Q9Y3Q4 1203 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 ZNF451Q9Y4E5 1061 aa15.53■□□□□ 0.08
CTCF-201ENST00000264010 FAM240BA0A1B0GVZ2 78 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 DLGAP1O14490 977 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms