RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PPCDCQ96CD2 204 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 REPS1Q96D71 796 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 ZBED6CLQ96FA7 236 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 WACQ9BTA9 647 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 ZDHHC6Q9H6R6 413 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 C1GALT1Q9NS00 363 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 NDUFB11Q9NX14 153 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 TRPM5Q9NZQ8 1165 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 CASKO14936 926 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 PRKYO43930 277 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 PLOD3O60568 738 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 DPM1O60762 260 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 CBSLP0DN79 551 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 CKBP12277 381 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 CBSP35520 551 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 CD79BP40259 229 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 AVPR1BP47901 424 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 ACLYP53396 1101 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 RBBP4Q09028 425 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 LYPLAL1Q5VWZ2 237 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 CNIH2Q6PI25 160 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 CEACAM20Q6UY09 585 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 CCDC28AQ8IWP9 274 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 PCSK9Q8NBP7 692 aaKnown RBP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 UPRTQ96BW1 309 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 SLC23A1Q9UHI7 598 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 HEPACAM2A8MVW5 462 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ISM1B1AKI9 464 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 NOS1APO75052 506 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 SEMA7AO75326 666 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 POU3F3P20264 500 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ALAS2P22557 587 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 TIA1P31483 386 aaKnown RBP eCLIP15.14■□□□□ 0.012e-8■■■■■ 36.7
LMNB1-201ENST00000261366 MLLT3P42568 568 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ASMTP46597 345 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 MBTPS1Q14703 1052 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 HEPACAMQ14CZ8 416 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 METTL2BQ6P1Q9 378 aaKnown RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 TRIM40Q6P9F5 258 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.14■□□□□ 0.012e-6■□□□□ 9.4
LMNB1-201ENST00000261366 PEX5LQ8IYB4 626 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 FAM109AQ8N4B1 249 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 NATD1Q8N6N6 113 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 NANOGP1Q8N7R0 232 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 OR52N2Q8NGI0 321 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 NEIL2Q969S2 332 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 TBC1D17Q9HA65 648 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 SLC25A19Q9HC21 320 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 B3GAT2Q9NPZ5 323 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 SPEF1Q9Y4P9 236 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ANKDD1BA6NHY2 528 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 C5orf58C9J3I9 102 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 RECKO95980 971 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 KLK1P06870 262 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ERP29P30040 261 aaKnown RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 GZMKP49863 264 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 PIN1Q13526 163 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 TRIM71Q2Q1W2 868 aaKnown RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 RETSATQ6NUM9 610 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 BRAT1Q6PJG6 821 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 COMMD6Q7Z4G1 85 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 FBXO22Q8NEZ5 403 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 CLP1Q92989 425 aaKnown RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 LRR1Q96L50 414 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 KATNB1Q9BVA0 655 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 MKRN2Q9H000 416 aaKnown RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 SH2B3Q9UQQ2 575 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 PCDHB7Q9Y5E2 793 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 MYO10Q9HD67 2058 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 IQCMA0A1B0GVH7 501 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 MPZL2O60487 215 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ALPPP05187 535 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ATP1B2P14415 290 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 SERPINA4P29622 427 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 PTGER1P34995 402 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 SOX18P35713 384 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 DCST1Q5T197 706 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 LIPJQ5W064 366 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ASB18Q6ZVZ8 466 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ARL14EPQ8N8R7 260 aaPredicted RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 DCLRE1CQ96SD1 692 aaKnown RBP15.14■□□□□ 0.01
LMNB1-201ENST00000261366 TMED9Q9BVK6 235 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 ANKRA2Q9H9E1 313 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 THSD1Q9NS62 852 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 UCKL1Q9NWZ5 548 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 MARCH5Q9NX47 278 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 PCDH10Q9P2E7 1040 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 MAPRE3Q9UPY8 281 aa15.14■□□□□ 0.01
LMNB1-201ENST00000261366 OSMP13725 252 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 RHCEP18577 417 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 PTNP21246 168 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 ALDH9A1P49189 494 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 RAB8AP61006 207 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 SYTL3Q4VX76 610 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 RNF180Q86T96 592 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 LHFPL3Q86UP9 236 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 LAPTM4BQ86VI4 370 aa15.13■□□□□ 0.01
LMNB1-201ENST00000261366 TM9SF4Q92544 642 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms