RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 KRT222Q8N1A0 295 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 FBXW8Q8N3Y1 598 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 RNF149Q8NC42 400 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 NUP37Q8NFH4 326 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 RNF139Q8WU17 664 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 SLC13A3Q8WWT9 602 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 GTF3AQ92664 365 aaKnown RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 C11orf52Q96A22 123 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 AP2M1Q96CW1 435 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 EEF2KMTQ96G04 330 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 LINC00479Q96M42 142 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 PRAM1Q96QH2 718 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 NAP1L3Q99457 506 aaPredicted RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 MCRIP2Q9BUT9 160 aaKnown RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 DGCR6LQ9BY27 220 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 SLC5A7Q9GZV3 580 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 DPEP2Q9H4A9 486 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 CLSTN2Q9H4D0 955 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 SPHK2Q9NRA0 654 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 NDE1Q9NXR1 346 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 UBQLN2Q9UHD9 624 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 ERRFI1Q9UJM3 462 aaPredicted RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 PTBP2Q9UKA9 531 aaKnown RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 RPH3AQ9Y2J0 694 aaPredicted RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 RNF123Q5XPI4 1314 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 MROH5Q6ZUA9 1318 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 SNED1Q8TER0 1413 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 KPNA7A9QM74 516 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 POLR3GO15318 223 aaPredicted RBP3.72□□□□□ -1.81
CCDC54-201ENST00000261058 DCXO43602 365 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 ERLIN1O75477 346 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 ZNF24P17028 368 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 CTNNA2P26232 953 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 SOX6P35712 828 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 MAGEA4P43358 317 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 SERPINH1P50454 418 aaKnown RBP3.72□□□□□ -1.81
CCDC54-201ENST00000261058 GBX2P52951 348 aaPredicted RBP3.72□□□□□ -1.81
CCDC54-201ENST00000261058 CASP9P55211 416 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 RWDD2BP57060 319 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 BEX3Q00994 111 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 CNTN1Q12860 1018 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 NFATC2Q13469 925 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 IDI1Q13907 227 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 PDIA5Q14554 519 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 MXD4Q14582 209 aaPredicted RBP3.72□□□□□ -1.81
CCDC54-201ENST00000261058 MAPK11Q15759 364 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 ACKR1Q16570 336 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 SGCBQ16585 318 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 MTHFSDQ2M296 383 aaKnown RBP3.72□□□□□ -1.81
CCDC54-201ENST00000261058 HFEQ30201 348 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 LRRC37A5PQ49AS3 106 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 TEX35Q5T0J7 233 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 PRAMEF8Q5VWM4 474 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 C17orf107Q6ZR85 190 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 Q6ZVQ6 151 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 EFCAB13Q8IY85 973 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 OR10G7Q8NGN6 311 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 OR5M9Q8NGP3 310 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 C11orf45Q8TAV5 145 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 SEPT8Q92599 483 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 SLC35C1Q96A29 364 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 RFT1Q96AA3 541 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 LRRC45Q96CN5 670 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 CNRIP1Q96F85 164 aaPredicted RBP3.72□□□□□ -1.81
CCDC54-201ENST00000261058 GAL3ST4Q96RP7 486 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 SYT11Q9BT88 431 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 CAPS2Q9BXY5 557 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 OSBPL8Q9BZF1 889 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 GFRA4Q9GZZ7 299 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 PARLQ9H300 379 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 CUEDC2Q9H467 287 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 VIPAS39Q9H9C1 493 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 MAGEF1Q9HAY2 307 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 IL20Q9NYY1 176 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 CHMP5Q9NZZ3 219 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 SPATA7Q9P0W8 599 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 FAM153AQ9UHL3 310 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 NCKAP1Q9Y2A7 1128 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 TTC21BQ7Z4L5 1316 aa3.72□□□□□ -1.81
CCDC54-201ENST00000261058 CACNA1FO60840 1977 aa3.71□□□□□ -1.81
CCDC54-201ENST00000261058 KRTAP16-1A8MUX0 517 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 EPM2AB3EWF7 344 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 MAGEB3O15480 346 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 VEGFDO43915 354 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 SPAG6O75602 509 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 ADCY5O95622 1261 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 FGFR1OPO95684 399 aaKnown RBP3.71□□□□□ -1.82
CCDC54-201ENST00000261058 FGF19O95750 216 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 IFNB1P01574 187 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 KRT5P13647 590 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 UGT1A4P22310 534 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 GPR183P32249 361 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 OR1D2P34982 312 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 RABIFP47224 123 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 TMEM50BP56557 158 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 BTG1P62324 171 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 CTAG1AP78358 180 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 MFGE8Q08431 387 aaPredicted RBP3.71□□□□□ -1.82
CCDC54-201ENST00000261058 CEACAM7Q14002 265 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms