RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MITFO75030 526 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 DCTN3O75935 186 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 MPOP05164 745 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 HSD17B1P14061 328 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 CDH2P19022 906 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 DRD1P21728 446 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 RNF144AP50876 292 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF155Q12901 538 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 DEPDC1Q5TB30 811 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ATP1A1-AS1Q5TC04 95 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 GRAMD4Q6IC98 578 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 PWWP2BQ6NUJ5 590 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 GJD3Q8N144 294 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ANKFN1Q8N957 763 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 OR6P1Q8NGX9 317 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ALKBH8Q96BT7 664 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 CCDC115Q96NT0 180 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 C1QTNF7Q9BXJ2 289 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SEMA4CQ9C0C4 833 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 RAB33BQ9H082 229 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 EHD1Q9H4M9 534 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 AKAP7Q9P0M2 348 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 R4GN57 208 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 CDRT15L2A8MXV6 281 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SNX2O60749 519 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 TBX19O60806 448 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 MFN2O95140 757 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 THRAP10827 490 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ETFAP13804 333 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CLK3P49761 638 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 GSK3BP49841 420 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CCR5P51681 352 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 AQP4P55087 323 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 OOSP2Q86WS3 158 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 OR2L8Q8NGY9 312 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 RDH11Q8TC12 318 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC38A5Q8WUX1 472 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC35A4Q96G79 324 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF597Q96LX8 424 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 IL1RL2Q9HB29 575 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 A0A1B0GTQ1 180 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM149AA5PLN7 773 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SMIM24O75264 130 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 KATNA1O75449 491 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 DIRAS1O95057 198 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ALPLP05186 524 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ELFN1P0C7U0 828 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ATP5A1P25705 553 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CERS1P27544 350 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 MAPK1P28482 360 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SERPINB5P36952 375 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 BUD31P41223 144 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 RPS6KA3P51812 740 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 HMGA2P52926 109 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CLDN8P56748 225 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC37A1P57057 533 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 B3GALT5-AS1P59052 145 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 FOXO1Q12778 655 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SYPL1Q16563 259 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CCDC153Q494R4 210 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SOWAHCQ53LP3 525 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 WDR5BQ86VZ2 330 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 OR2L13Q8N349 312 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 STARD8Q92502 1023 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 TM9SF4Q92544 642 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 FAR2Q96K12 515 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 HSPA12BQ96MM6 686 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 BBC3Q96PG8 261 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CCDC167Q9P0B6 97 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 DCDC2Q9UHG0 476 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 GMEB2Q9UKD1 530 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 LSM2Q9Y333 95 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 A0A087X1B8 175 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 TBC1D3BA6NDS4 549 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 BNIP3LO60238 219 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 AIFM1O95831 613 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 AQP6Q13520 282 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF684Q5T5D7 378 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 NXPE4Q6UWF7 544 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ACAD11Q709F0 780 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SNX32Q86XE0 403 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 PPHLN1Q8NEY8 458 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 HMGB4Q8WW32 186 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 DCUN1D1Q96GG9 259 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC30A2Q9BRI3 323 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 LRFN3Q9BTN0 628 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 NLNQ9BYT8 704 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 PREBQ9HCU5 417 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 ACER3Q9NUN7 267 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 KCTD5Q9NXV2 234 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 CTSFQ9UBX1 484 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 AP1M2Q9Y6Q5 423 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 DNAH5Q8TE73 4624 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 STAB1Q9NY15 2570 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 LMO7DNF2Z398 122 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 H0YC42 278 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 TRIM16O95361 564 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 EBLN1P0CF75 366 aa5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 POLR2EP19388 210 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-201ENST00000260810 TTPAP49638 278 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms