RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 RAD21L1Q9H4I0 556 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 SCN2AQ99250 2005 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 ACOX3O15254 700 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 B3GALT2O43825 422 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 DEAF1O75398 565 aaPredicted RBP21.12■□□□□ 0.97
SIX3-201ENST00000260653 GCM2O75603 506 aaPredicted RBP21.12■□□□□ 0.97
SIX3-201ENST00000260653 CTSKP43235 329 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 BNC1Q01954 994 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 INTS11Q5TA45 600 aaKnown RBP21.12■□□□□ 0.97
SIX3-201ENST00000260653 PPP4R4Q6NUP7 873 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 VTCN1Q7Z7D3 282 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 WDR5BQ86VZ2 330 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 SHISA5Q8N114 240 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 NFKBIDQ8NI38 313 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 CSF3RQ99062 836 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 BDH2Q9BUT1 245 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 AP4B1Q9Y6B7 739 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 MYO1GB0I1T2 1018 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 UPK1AO00322 258 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 GPC1P35052 558 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 CCT3P49368 545 aaKnown RBP21.12■□□□□ 0.97
SIX3-201ENST00000260653 LIM2P55344 173 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 GFERP55789 205 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 TNFRSF17Q02223 184 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 TP53BP2Q13625 1128 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 SCARB2Q14108 478 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 PMS2CLQ68D20 193 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 TNFAIP8L2Q6P589 184 aaPredicted RBP21.12■□□□□ 0.97
SIX3-201ENST00000260653 CCDC116Q8IYX3 515 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 ZNF597Q96LX8 424 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 ASPSCR1Q9BZE9 553 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 TMEM38AQ9H6F2 299 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 ENTPD4Q9Y227 616 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 RNF215Q9Y6U7 377 aa21.12■□□□□ 0.97
SIX3-201ENST00000260653 LAMTOR5O43504 91 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 ZNF23P17027 643 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 CPN2P22792 545 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 C6orf52Q5T4I8 152 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 CEACAM20Q6UY09 585 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 CBLL1Q75N03 491 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 SZRD1Q7Z422 152 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 C6orf120Q7Z4R8 191 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 HORMAD2Q8N7B1 307 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 C9orf16Q9BUW7 83 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 RPS6KA6Q9UK32 745 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 DAPP1Q9UN19 280 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 SPEGQ15772 3267 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 A0A1B0GTW7 788 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 RHPN2P1A8MT19 583 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 PRSS23O95084 383 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 CST1P01037 141 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 ALDH4A1P30038 563 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 DSTNP60981 165 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 EEF1A2Q05639 463 aaKnown RBP21.11■□□□□ 0.97
SIX3-201ENST00000260653 TMTC4Q5T4D3 741 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 NKAIN2Q5VXU1 208 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 ZFP28Q8NHY6 868 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 C10orf90Q96M02 699 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 TGM7Q96PF1 710 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 ERVMER34-1Q9H9K5 563 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 LRIT1Q9P2V4 623 aa21.11■□□□□ 0.97
SIX3-201ENST00000260653 ZNF10P21506 573 aaPredicted RBP21.1■□□□□ 0.97
SIX3-201ENST00000260653 BUD31P41223 144 aaPredicted RBP21.1■□□□□ 0.97
SIX3-201ENST00000260653 RBBP4Q09028 425 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 MED21Q13503 144 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 C6orf132Q5T0Z8 1188 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 EIF3MQ7L2H7 374 aaKnown RBP21.1■□□□□ 0.97
SIX3-201ENST00000260653 ZC3H7AQ8IWR0 971 aaKnown RBP21.1■□□□□ 0.97
SIX3-201ENST00000260653 MAML2Q8IZL2 1156 aaPredicted RBP21.1■□□□□ 0.97
SIX3-201ENST00000260653 POP5Q969H6 163 aaKnown RBP21.1■□□□□ 0.97
SIX3-201ENST00000260653 TMBIM1Q969X1 311 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 HSH2DQ96JZ2 352 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 PHF11Q9UIL8 331 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 RAB26Q9ULW5 256 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 DMDP11532 3685 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 H0YJX3 145 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 GIMD1P0DJR0 217 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 CDK6Q00534 326 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 CSTF1Q05048 431 aaKnown RBP21.1■□□□□ 0.97
SIX3-201ENST00000260653 SPIDRQ14159 915 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 SHBQ15464 509 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 MANEAQ5SRI9 462 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 SPRED1Q7Z699 444 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 MAGED4Q96JG8 741 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 ELF4Q99607 663 aaPredicted RBP21.1■□□□□ 0.97
SIX3-201ENST00000260653 NAALAD2Q9Y3Q0 740 aa21.1■□□□□ 0.97
SIX3-201ENST00000260653 TNRC6BQ9UPQ9 1833 aaKnown RBP21.09■□□□□ 0.97
SIX3-201ENST00000260653 EI24O14681 340 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 OPN1SWP03999 348 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 ARAFP10398 606 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 CSNK2A2P19784 350 aaPredicted RBP21.09■□□□□ 0.97
SIX3-201ENST00000260653 HSPA13P48723 471 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 IST1P53990 364 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 MCATQ8IVS2 390 aaKnown RBP21.09■□□□□ 0.97
SIX3-201ENST00000260653 SLC35F3Q8IY50 421 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 OR5T3Q8NGG3 340 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 NCSTNQ92542 709 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 EDAQ92838 391 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 TPD52L3Q96J77 140 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 ZNF681Q96N22 645 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms