RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CLEC1AQ8NC01 280 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 PLPP5Q8NEB5 264 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 METTL6Q8TCB7 284 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 SELENOMQ8WWX9 145 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 CMTM5Q96DZ9 223 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 SERPINI1Q99574 410 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 VCX3BQ9H321 246 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 ATP13A2Q9NQ11 1180 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 FARSBQ9NSD9 589 aaKnown RBP15.77■□□□□ 0.11
SDCBP-201ENST00000260130 DAPP1Q9UN19 280 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 SMG1Q96Q15 3661 aaKnown RBP15.77■□□□□ 0.11
SDCBP-201ENST00000260130 PCSK5Q92824 1860 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 LOC102723996A0A087X1L8 192 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 FAM227AF5H4B4 570 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 PLPP1O14494 284 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 UBFD1O14562 309 aaKnown RBP15.76■□□□□ 0.11
SDCBP-201ENST00000260130 SCELO95171 688 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 PDYNP01213 254 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 KRT6AP02538 564 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 KRT6BP04259 564 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 SFTPCP11686 197 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 KRT6CP48668 564 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 LIM2P55344 173 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 ABCE1P61221 599 aaKnown RBP15.76■□□□□ 0.11
SDCBP-201ENST00000260130 RHAGQ02094 409 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 SLC39A7Q92504 469 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 JADE3Q92613 823 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 CCDC28BQ9BUN5 200 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 GATA5Q9BWX5 397 aaPredicted RBP15.76■□□□□ 0.11
SDCBP-201ENST00000260130 SLC29A3Q9BZD2 475 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 S100A14Q9HCY8 104 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 MID1IP1Q9NPA3 183 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 MKRN2OSH3BPM6 223 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 IDH3AP50213 366 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 RAB38P57729 211 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 NSDHLQ15738 373 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 SOWAHCQ53LP3 525 aaPredicted RBP15.76■□□□□ 0.11
SDCBP-201ENST00000260130 NDUFAF7Q7L592 441 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 ADAMTS18Q8TE60 1221 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 SREK1Q8WXA9 508 aaKnown RBP15.76■□□□□ 0.11
SDCBP-201ENST00000260130 ABHD17AQ96GS6 310 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 SORT1Q99523 831 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 SORBS1Q9BX66 1292 aaKnown RBP15.76■□□□□ 0.11
SDCBP-201ENST00000260130 FAM192AQ9GZU8 254 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 LYRM4Q9HD34 91 aa15.76■□□□□ 0.11
SDCBP-201ENST00000260130 C19orf25Q9UFG5 118 aaPredicted RBP15.76■□□□□ 0.11
SDCBP-201ENST00000260130 A0A1W2PQ72 361 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 MASP2O00187 686 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 MANBAO00462 879 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 PRMT3O60678 531 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 ULK1O75385 1050 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 HMOX2P30519 316 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 SLC25A3Q00325 362 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 ABRAXAS2Q15018 415 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 QSOX2Q6ZRP7 698 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 ACTRT2Q8TDY3 377 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 PTCHD1Q96NR3 888 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 BRF2Q9HAW0 419 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 KCMF1Q9P0J7 381 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 BOD1L1Q8NFC6 3051 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 IGHV1-45A0A0A0MS14 117 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 SEMA3DO95025 777 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 HPP00738 406 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 COX6A1P12074 109 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 PRDX6P30041 224 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 BSGP35613 385 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 BTG2P78543 158 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 EEF1A2Q05639 463 aaKnown RBP15.75■□□□□ 0.11
SDCBP-201ENST00000260130 AIMP2Q13155 320 aaKnown RBP15.75■□□□□ 0.11
SDCBP-201ENST00000260130 SLAMF1Q13291 335 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 TCHHL1Q5QJ38 904 aaPredicted RBP15.75■□□□□ 0.11
SDCBP-201ENST00000260130 FAM219BQ5XKK7 198 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 LANCL3Q6ZV70 420 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 CPEB2Q7Z5Q1 589 aaKnown RBP15.75■□□□□ 0.11
SDCBP-201ENST00000260130 ZCCHC7Q8N3Z6 543 aaKnown RBP15.75■□□□□ 0.11
SDCBP-201ENST00000260130 CNDP1Q96KN2 507 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 SH3GL3Q99963 347 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 MAPKAP1Q9BPZ7 522 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 ZNF717Q9BY31 904 aaPredicted RBP15.75■□□□□ 0.11
SDCBP-201ENST00000260130 ZNF700Q9H0M5 742 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 PAPOLBQ9NRJ5 636 aaKnown RBP15.75■□□□□ 0.11
SDCBP-201ENST00000260130 PNPOQ9NVS9 261 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 MRPS33Q9Y291 106 aaKnown RBP15.75■□□□□ 0.11
SDCBP-201ENST00000260130 TIMM22Q9Y584 194 aa15.75■□□□□ 0.11
SDCBP-201ENST00000260130 NSG1A0A0A6YYJ2 146 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 A6NL46 340 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 CYR61O00622 381 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 CEACAM4O75871 244 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 SOX8P57073 446 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 RNF220Q5VTB9 566 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 ANKRD37Q7Z713 158 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 DHDDSQ86SQ9 333 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 GALNT16Q8N428 558 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 FAM47BQ8NA70 645 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 TSLPQ969D9 159 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 KCNA7Q96RP8 456 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 TRMOQ9BU70 441 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 SEMA4CQ9C0C4 833 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 DDX31Q9H8H2 851 aaKnown RBP15.74■□□□□ 0.11
SDCBP-201ENST00000260130 ZNF160Q9HCG1 818 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms