RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PLBD1Q6P4A8 553 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 CASC1Q6TDU7 716 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 METTL7BQ6UX53 244 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 ISCA2Q86U28 154 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 NUDT13Q86X67 352 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 FAM219AQ8IW50 185 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 SLC39A11Q8N1S5 342 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 ZBTB44Q8NCP5 570 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 DDHD1Q8NEL9 900 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 HCAR2Q8TDS4 363 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 BSCL2Q96G97 398 aaPredicted RBP4.24□□□□□ -1.73
TRA2B-201ENST00000259043 CABS1Q96KC9 395 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 FTHL17Q9BXU8 183 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 NACAP1Q9BZK3 213 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 MINDY3Q9H8M7 445 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 SERINC1Q9NRX5 453 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 RGS18Q9NS28 235 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 ECHDC1Q9NTX5 307 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 ANGPTL2Q9UKU9 493 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 MRPL11Q9Y3B7 192 aaKnown RBP4.24□□□□□ -1.73
TRA2B-201ENST00000259043 MTF2Q9Y483 593 aaPredicted RBP4.24□□□□□ -1.73
TRA2B-201ENST00000259043 MTCL1Q9Y4B5 1905 aaKnown RBP4.24□□□□□ -1.73
TRA2B-201ENST00000259043 TENM4Q6N022 2769 aa4.24□□□□□ -1.73
TRA2B-201ENST00000259043 MYH9P35579 1960 aaKnown RBP4.23□□□□□ -1.73
TRA2B-201ENST00000259043 STK36Q9NRP7 1315 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 LAMA5O15230 3695 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 FREM2Q5SZK8 3169 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 UNC79Q9P2D8 2635 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 SDR42E2A6NKP2 422 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 SHISA7A6NL88 538 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 KALRNO60229 2985 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 RTN2O75298 545 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 ZFAND5O76080 213 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 NGFP01138 241 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 FAM157CP0CG43 387 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 ACP2P11117 423 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 TCF4P15884 667 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 MPZP25189 248 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 CCND2P30279 289 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 CLK1P49759 484 aaKnown RBP4.23□□□□□ -1.73
TRA2B-201ENST00000259043 RGS7P49802 495 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 AP1B1Q10567 949 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 ALX1Q15699 326 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 SYT14P1Q58G82 188 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 FFAR4Q5NUL3 377 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 ELFN2Q5R3F8 820 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 TMEM182Q6ZP80 229 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-201ENST00000259043 NUP54Q7Z3B4 507 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 TMPRSS11BQ86T26 416 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 CREBRFQ8IUR6 639 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 TBC1D10CQ8IV04 446 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 CFAP206Q8IYR0 622 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 CPSF7Q8N684 471 aaKnown RBP4.23□□□□□ -1.73
TRA2B-201ENST00000259043 RNF128Q8TEB7 428 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 KRT35Q92764 455 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 SGK494Q96LW2 274 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 MYADMQ96S97 322 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 HNRNPABQ99729 332 aaKnown RBP4.23□□□□□ -1.73
TRA2B-201ENST00000259043 ACAT2Q9BWD1 397 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 PRRG4Q9BZD6 226 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 SLC5A7Q9GZV3 580 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 MIS12Q9H081 205 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 FAM49AQ9H0Q0 323 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-201ENST00000259043 ZBP1Q9H171 429 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 MID1IP1Q9NPA3 183 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 ACKR4Q9NPB9 350 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 GKN1Q9NS71 199 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 DNAJC17Q9NVM6 304 aaKnown RBP4.23□□□□□ -1.73
TRA2B-201ENST00000259043 TMEM161AQ9NX61 479 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 MOSPD1Q9UJG1 213 aa4.23□□□□□ -1.73
TRA2B-201ENST00000259043 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.23□□□□□ -1.73
TRA2B-201ENST00000259043 NEDD4P46934 1319 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 PDCD11Q14690 1871 aaKnown RBP4.22□□□□□ -1.73
TRA2B-201ENST00000259043 BAZ2BQ9UIF8 2168 aaKnown RBP4.22□□□□□ -1.73
TRA2B-201ENST00000259043 ANHXE9PGG2 379 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 M0QZ92 97 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 RNASEH1O60930 286 aaKnown RBP4.22□□□□□ -1.73
TRA2B-201ENST00000259043 KERAO60938 352 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 EML2O95834 649 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 WDPCPO95876 746 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 MT-ND3P03897 115 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 PROS1P07225 676 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 TDGF1P13385 188 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 IRF2P14316 349 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 ITIH1P19827 911 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 TIA1P31483 386 aaKnown RBP eCLIP4.22□□□□□ -1.73
TRA2B-201ENST00000259043 CASP3P42574 277 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 KHKP50053 298 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 PDX1P52945 283 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 MFAP3P55082 362 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 UBASH3AP57075 661 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 STARD6P59095 220 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 MAT1AQ00266 395 aaKnown RBP4.22□□□□□ -1.73
TRA2B-201ENST00000259043 SP4Q02446 784 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 SMC1AQ14683 1233 aaKnown RBP4.22□□□□□ -1.73
TRA2B-201ENST00000259043 P2RY6Q15077 328 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 NONOQ15233 471 aaKnown RBP eCLIP4.22□□□□□ -1.73
TRA2B-201ENST00000259043 LPAL2Q16609 132 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 ZNF528Q3MIS6 628 aa4.22□□□□□ -1.73
TRA2B-201ENST00000259043 CLLU1OSQ5K130 101 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms