RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 OR7D4Q8NG98 312 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 SP7Q8TDD2 431 aaPredicted RBP3.96□□□□□ -1.77
UBE4A-201ENST00000252108 MRPS31Q92665 395 aaKnown RBP3.96□□□□□ -1.77
UBE4A-201ENST00000252108 KCNC2Q96PR1 638 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 NXF2Q9GZY0 626 aaKnown RBP3.96□□□□□ -1.77
UBE4A-201ENST00000252108 REEP4Q9H6H4 257 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 IL26Q9NPH9 171 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 INIPQ9NRY2 104 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 C14orf105Q9NVL8 296 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 MS4A12Q9NXJ0 267 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 AASSQ9UDR5 926 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 PFDN2Q9UHV9 154 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 UTS2RQ9UKP6 389 aa3.96□□□□□ -1.77
UBE4A-201ENST00000252108 MEIOCA2RUB1 952 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 C2orf78A6NCI8 922 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 SCAMP2O15127 329 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 SLC43A1O75387 559 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 OR2B3O76000 313 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PIRTP0C851 137 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 UQCRC2P22695 453 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ACRV1P26436 265 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 RPL10P27635 214 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 WEE1P30291 646 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 RAE1P78406 368 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 HMGCS1Q01581 520 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 CHRNEQ04844 493 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 IL18Q14116 193 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PTGR1Q14914 329 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 CARTPTQ16568 116 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ATAD3CQ5T2N8 411 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ADNP2Q6IQ32 1131 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 REEP3Q6NUK4 255 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 FAM151BQ6UXP7 276 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 KIF18BQ86Y91 864 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 TCTE3Q8IZS6 198 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PSD4Q8NDX1 1056 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 OR52L1Q8NGH7 329 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 SETD7Q8WTS6 366 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ELMO1Q92556 727 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 THRSPQ92748 146 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF514Q96K75 400 aaPredicted RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 MED18Q9BUE0 208 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 MRI1Q9BV20 369 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 NSUN3Q9H649 340 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 POLE3Q9NRF9 147 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 SNTG1Q9NSN8 517 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF624Q9P2J8 865 aaPredicted RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 NDOR1Q9UHB4 597 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PRELID1Q9Y255 219 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PMF1-BGLAPU3KQ54 211 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ADAMTS20P59510 1910 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 UBE2QL1A1L167 161 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF670-ZNF695F2Z2N8 137 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PGRMC2O15173 223 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ATG13O75143 517 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 LGI1O95970 557 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 AGR2O95994 175 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 LCKP06239 509 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ANXA3P12429 323 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 CCT3P49368 545 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 DAPP51397 102 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 DCDC1P59894 354 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 RPS24P62847 133 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF763Q0D2J5 394 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 CTU2Q2VPK5 515 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 C18orf21Q32NC0 220 aaPredicted RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 MPPE1Q53F39 396 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 TPRG1Q6ZUI0 275 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PTOV1Q86YD1 416 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 NPAS4Q8IUM7 802 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 SAMD14Q8IZD0 417 aaPredicted RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 GOT1L1Q8NHS2 421 aaPredicted RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 GGHQ92820 318 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 SLITRK2Q9H156 845 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PTGFRNQ9P2B2 879 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 TSR3Q9UJK0 312 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 EYSQ5T1H1 3165 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 A0A0U1RQS6 177 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PCDH7O60245 1069 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 PRAF2O60831 178 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ADRA2AP08913 450 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ADORA3P0DMS8 318 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 IRF1P10914 325 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 GNSP15586 552 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 SELPP16109 830 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 GPC1P35052 558 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 CLK3P49761 638 aaKnown RBP3.96□□□□□ -1.78
UBE4A-201ENST00000252108 KHKP50053 298 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 LBX1P52954 281 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 NFATC2Q13469 925 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 RAB30Q15771 203 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 COL28A1Q2UY09 1125 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF311Q5JNZ3 666 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM164Q5U3C3 297 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 FAM171A1Q5VUB5 890 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 GRHL2Q6ISB3 625 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 GAREM2Q75VX8 874 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 ELMOD2Q8IZ81 293 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.78
UBE4A-201ENST00000252108 CXorf40AQ8TE69 158 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms