RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 REEP3Q6NUK4 255 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 NCCRP1Q6ZVX7 275 aaPredicted RBP20.82■□□□□ 0.92
RNF39-201ENST00000244360 UBE3DQ7Z6J8 389 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 RPL3LQ92901 407 aaKnown RBP20.82■□□□□ 0.92
RNF39-201ENST00000244360 UBE2FQ969M7 185 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 RGMAQ96B86 450 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 KCNC2Q96PR1 638 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 LMAN2LQ9H0V9 348 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 SP140LQ9H930 580 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 PHPT1Q9NRX4 125 aaPredicted RBP20.82■□□□□ 0.92
RNF39-201ENST00000244360 YBX2Q9Y2T7 364 aaKnown RBP20.82■□□□□ 0.92
RNF39-201ENST00000244360 PCDHGA2Q9Y5H1 932 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 ENPP4Q9Y6X5 453 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 A0A1W2PP55 124 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 PRR19A6NJB7 356 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 CDC20Q12834 499 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 NUMA1Q14980 2115 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 TIGD6Q17RP2 521 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 LGI4Q8N135 537 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 RAB42Q8N4Z0 105 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 DENND6BQ8NEG7 585 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 ABCG4Q9H172 646 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 CPNE5Q9HCH3 593 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 RLIMQ9NVW2 624 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 ENOPH1Q9UHY7 261 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.82■□□□□ 0.92
RNF39-201ENST00000244360 SNX8Q9Y5X2 465 aa20.82■□□□□ 0.92
RNF39-201ENST00000244360 DOCK8Q8NF50 2099 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 METTL15A6NJ78 407 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 AQP9O43315 295 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 TMPRSS11DO60235 418 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 ACP5P13686 325 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 LIPAP38571 399 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 ZNF181Q2M3W8 571 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 C9orf50Q5SZB4 431 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 NUDT18Q6ZVK8 323 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 CADM3Q8N126 398 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 AMER2Q8N7J2 671 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 KBTBD8Q8NFY9 601 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 APOBEC4Q8WW27 367 aaKnown RBP20.81■□□□□ 0.92
RNF39-201ENST00000244360 C12orf66Q96MD2 445 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 CDCA3Q99618 268 aaPredicted RBP20.81■□□□□ 0.92
RNF39-201ENST00000244360 C1QTNF2Q9BXJ5 285 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 DDX31Q9H8H2 851 aaKnown RBP20.81■□□□□ 0.92
RNF39-201ENST00000244360 SIRT3Q9NTG7 399 aaPredicted RBP20.81■□□□□ 0.92
RNF39-201ENST00000244360 ACER3Q9NUN7 267 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 RAB23Q9ULC3 237 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 UGT2A1Q9Y4X1 527 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 TRBC2A0A5B9 178 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 KDM1AO60341 852 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 RPLP0P05388 317 aaKnown RBP20.81■□□□□ 0.92
RNF39-201ENST00000244360 FAM180BQ6P0A1 224 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 CEACAM20Q6UY09 585 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 HORMAD2Q8N7B1 307 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 PSMA8Q8TAA3 256 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 CAMK1GQ96NX5 476 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 COL21A1Q96P44 957 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 FERD3LQ96RJ6 166 aa20.81■□□□□ 0.92
RNF39-201ENST00000244360 CCDC59Q9P031 241 aaKnown RBP20.81■□□□□ 0.92
RNF39-201ENST00000244360 IGKV1-8A0A0C4DH67 115 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 M0R082 166 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 OR1F1O43749 312 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 CLEC3AO75596 197 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 UPK1BO75841 260 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 PKLRP30613 574 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 TMED10P49755 219 aaKnown RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 RAB28P51157 221 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 MANFP55145 182 aaKnown RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 TRA2BP62995 288 aaKnown RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 OLR1P78380 273 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 PRDX1Q06830 199 aaKnown RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 SLC46A3Q7Z3Q1 461 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 CREB3L4Q8TEY5 395 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 FAM131CQ96AQ9 280 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 CRELD1Q96HD1 420 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 RMI1Q9H9A7 625 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 TAS2R7Q9NYW3 318 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 ARRDC5A6NEK1 342 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 J3KTA2 159 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 PAK4O96013 591 aaPredicted RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 VIPP01282 170 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 RHCEP18577 417 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 ALDH9A1P49189 494 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 ZNF776Q68DI1 518 aaPredicted RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 Q6ZPB1 254 aaPredicted RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 ZNF513Q8N8E2 541 aaPredicted RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 OR2A1Q8NGT9 310 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 OR52J3Q8NH60 311 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 SLC38A5Q8WUX1 472 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 GGHQ92820 318 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 KXD1Q9BQD3 176 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 NXF2Q9GZY0 626 aaKnown RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 BTBD1Q9H0C5 482 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 ACSS1Q9NUB1 689 aaPredicted RBP20.8■□□□□ 0.92
RNF39-201ENST00000244360 KCND3Q9UK17 655 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.8■□□□□ 0.92
RNF39-201ENST00000244360 SLC17A4Q9Y2C5 497 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 PLXND1Q9Y4D7 1925 aa20.8■□□□□ 0.92
RNF39-201ENST00000244360 A0A0A6YYD5 115 aa20.79■□□□□ 0.92
RNF39-201ENST00000244360 LCMT2O60294 686 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms