RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 C7orf57Q8NEG2 295 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 GPR156Q8NFN8 814 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 OR13H1Q8NG92 308 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 NUDT8Q8WV74 236 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 OR1E3Q8WZA6 343 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 GFM2Q969S9 779 aaKnown RBP10.12□□□□□ -0.79
CDCA3-201ENST00000229265 DGCR14Q96DF8 476 aaKnown RBP10.12□□□□□ -0.79
CDCA3-201ENST00000229265 TM4SF19Q96DZ7 209 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 NEURL3Q96EH8 262 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 PDXPQ96GD0 296 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 F2RL3Q96RI0 385 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 DOHHQ9BU89 302 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 ADI1Q9BV57 179 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 GABARAPL1Q9H0R8 117 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 SRMSQ9H3Y6 488 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 PIF1Q9H611 641 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 UCK1Q9HA47 277 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 PRM3Q9NNZ6 103 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 PRDM8Q9NQV8 689 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 SLC6A13Q9NSD5 602 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 DDX18Q9NVP1 670 aaKnown RBP10.12□□□□□ -0.79
CDCA3-201ENST00000229265 LYARQ9NX58 379 aaKnown RBP10.12□□□□□ -0.79
CDCA3-201ENST00000229265 GMPR2Q9P2T1 348 aaKnown RBP10.12□□□□□ -0.79
CDCA3-201ENST00000229265 TBC1D29Q9UFV1 150 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 SH2B3Q9UQQ2 575 aa10.12□□□□□ -0.79
CDCA3-201ENST00000229265 GOLGA4Q13439 2230 aaKnown RBP10.12□□□□□ -0.79
CDCA3-201ENST00000229265 A0A0A6YYD5 115 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 IGKV1-8A0A0C4DH67 115 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 TRIM64CA6NLI5 447 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 H3BNH8 94 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 SCAMP1O15126 338 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 SLC16A6O15403 523 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ZSCAN9O15535 394 aaPredicted RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 NDUFS4O43181 175 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 FOXD2O60548 495 aaPredicted RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 UGT2B11O75310 529 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ALBP02768 609 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ALPLP05186 524 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 FABP3P05413 133 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 IL3P08700 152 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 CDH2P19022 906 aaPredicted RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 DNAJA1P31689 397 aaKnown RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 SLC19A1P41440 591 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 AFF3P51826 1226 aaKnown RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 HMGA2P52926 109 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 MVDP53602 400 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 MANFP55145 182 aaKnown RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 CSNK2BP67870 215 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 CEBPEQ15744 281 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 GTDC1Q4AE62 458 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 C6orf52Q5T4I8 152 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 PRAMEF8Q5VWM4 474 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 PRAMEF7Q5VXH5 474 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 OR2T5Q6IEZ7 315 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ABHD17CQ6PCB6 329 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ANKRD46Q86W74 232 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 PAQR7Q86WK9 346 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ARMC8Q8IUR7 673 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ZDHHC21Q8IVQ6 265 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ADGRF3Q8IZF5 1079 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 CLECL1Q8IZS7 167 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 NAGSQ8N159 534 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ZNF655Q8N720 491 aaPredicted RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 OR2T29Q8NH02 315 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 WDR48Q8TAF3 677 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 MAGEE2Q8TD90 523 aaPredicted RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 RSC1A1Q92681 617 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 TMBIM1Q969X1 311 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 MS4A6EQ96DS6 147 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 SLC35A5Q9BS91 424 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 DPH7Q9BTV6 452 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 SPATA5L1Q9BVQ7 753 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ACAT2Q9BWD1 397 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 SPNS1Q9H2V7 528 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 PRDM7Q9NQW5 492 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 CUEDC1Q9NWM3 386 aaPredicted RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 UBAP1Q9NZ09 502 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ZNF624Q9P2J8 865 aaPredicted RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ZMIZ1Q9ULJ6 1067 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 ORC6Q9Y5N6 252 aa10.11□□□□□ -0.79
CDCA3-201ENST00000229265 CFAP20Q9Y6A4 193 aaKnown RBP10.11□□□□□ -0.79
CDCA3-201ENST00000229265 KIF26BQ2KJY2 2108 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 SMG1Q96Q15 3661 aaKnown RBP10.1□□□□□ -0.79
CDCA3-201ENST00000229265 APC2O95996 2303 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 A0A087WXM4 84 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 A0A1W2PNU3 283 aaPredicted RBP10.1□□□□□ -0.79
CDCA3-201ENST00000229265 OR2A25A4D2G3 310 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 TMEM247A6NEH6 219 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 C2orf74A8MZ97 194 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 ISM1B1AKI9 464 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 PDPK1O15530 556 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 MRPS14O60783 128 aaKnown RBP10.1□□□□□ -0.79
CDCA3-201ENST00000229265 SLITRK5O94991 958 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 BMP10O95393 424 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 VIPP01282 170 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 SYPP08247 313 aa10.1□□□□□ -0.79
CDCA3-201ENST00000229265 UBTFL6P0CB48 400 aaPredicted RBP10.1□□□□□ -0.79
CDCA3-201ENST00000229265 SMIM10L1P0DMW3 83 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms