RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ASNA1O43681 348 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 OR6B1O95007 311 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 RPS17P08708 135 aaKnown RBP13.21□□□□□ -0.3
GPN3-201ENST00000228827 SBK3P0C264 359 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 FAM58BPP0C7Q3 252 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 COX7A2P14406 83 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 SOX3P41225 446 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 CA7P43166 264 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 STT3AP46977 705 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 HK2P52789 917 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 CASP6P55212 293 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 CDH13P55290 713 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 RNF4P78317 190 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 IGLV3-21P80748 117 aaPredicted RBP13.21□□□□□ -0.3
GPN3-201ENST00000228827 TRAF3Q13114 568 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 KRTCAP3Q53RY4 240 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 MRM1Q6IN84 353 aaKnown RBP13.21□□□□□ -0.3
GPN3-201ENST00000228827 MILR1Q7Z6M3 343 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 NUDT13Q86X67 352 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 OR4F6Q8NGB9 312 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 ZNF721Q8TF20 911 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 TANKQ92844 425 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 UCN3Q969E3 161 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 RASL10BQ96S79 203 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 SERPINI1Q99574 410 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 NTMT1Q9BV86 223 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 TIMMDC1Q9NPL8 285 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 LYARQ9NX58 379 aaKnown RBP13.21□□□□□ -0.3
GPN3-201ENST00000228827 MYOTQ9UBF9 498 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 SUCOQ9UBS9 1254 aaKnown RBP13.21□□□□□ -0.3
GPN3-201ENST00000228827 COPS7AQ9UBW8 275 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 ASB4Q9Y574 426 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 A0A1B0GTL3 188 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 A0A1W2PR48 441 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 KLRC4-KLRK1H3BQV0 150 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 HRKO00198 91 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 TFECO14948 347 aaPredicted RBP13.2□□□□□ -0.3
GPN3-201ENST00000228827 AIFM1O95831 613 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 NR2F6P10588 404 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 ALOX15P16050 662 aaPredicted RBP13.2□□□□□ -0.3
GPN3-201ENST00000228827 DCTP40126 519 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 PLIN5Q00G26 463 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 IFT88Q13099 833 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 CUL3Q13618 768 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 FRG2Q64ET8 278 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 ADGRD1Q6QNK2 874 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 TIFABQ6ZNK6 161 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 TMEM151AQ8N4L1 468 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 MTBPQ96DY7 904 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 RBM18Q96H35 190 aaKnown RBP13.2□□□□□ -0.3
GPN3-201ENST00000228827 CCDC120Q96HB5 630 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 SENP5Q96HI0 755 aaPredicted RBP13.2□□□□□ -0.3
GPN3-201ENST00000228827 FRG2BQ96QU4 278 aa13.2□□□□□ -0.3
GPN3-201ENST00000228827 DDX31Q9H8H2 851 aaKnown RBP13.2□□□□□ -0.3
GPN3-201ENST00000228827 FARSBQ9NSD9 589 aaKnown RBP13.2□□□□□ -0.3
GPN3-201ENST00000228827 RP1L1Q8IWN7 2480 aaPredicted RBP13.19□□□□□ -0.3
GPN3-201ENST00000228827 SCN2AQ99250 2005 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 G3V3Y1 287 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 GOLGA8RI6L899 631 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 DYRK3O43781 588 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 HS6ST1O60243 411 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 OR10H2O60403 315 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 CDC40O60508 579 aaKnown RBP eCLIP13.19□□□□□ -0.3
GPN3-201ENST00000228827 KLK1P06870 262 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 ABOP16442 354 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 PTGER1P34995 402 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 ARFIP1P53367 373 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 SLC29A2Q14542 456 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.19□□□□□ -0.3
GPN3-201ENST00000228827 ZNF750Q32MQ0 723 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 SPPL2CQ8IUH8 684 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 GHDCQ8N2G8 530 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 PSD4Q8NDX1 1056 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 TRPC4APQ8TEL6 797 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 ZNF483Q8TF39 744 aaPredicted RBP13.19□□□□□ -0.3
GPN3-201ENST00000228827 CNPPD1Q9BV87 410 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 MRPL1Q9BYD6 325 aaKnown RBP13.19□□□□□ -0.3
GPN3-201ENST00000228827 ELOVL6Q9H5J4 265 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 PSD3Q9NYI0 1048 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 TMEM216Q9P0N5 145 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 TBK1Q9UHD2 729 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 NBPF19A0A087WUL8 3843 aa13.19□□□□□ -0.3
GPN3-201ENST00000228827 IQANK1A0A1B0GTG1 560 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 PINLYPA6NC86 204 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 PGRMC2O15173 223 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 ZNF354AO60765 605 aaPredicted RBP13.18□□□□□ -0.3
GPN3-201ENST00000228827 GPR75O95800 540 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 OTCP00480 354 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 ESRRAP11474 423 aaPredicted RBP13.18□□□□□ -0.3
GPN3-201ENST00000228827 TAC1P20366 129 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 HERVK_113P63132 956 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 ERVK-8P63133 956 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 ASPHQ12797 758 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
GPN3-201ENST00000228827 LETMD1Q6P1Q0 360 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 C9orf40Q8IXQ3 194 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 GPALPP1Q8IXQ4 340 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 ST13P4Q8IZP2 240 aaPredicted RBP13.18□□□□□ -0.3
GPN3-201ENST00000228827 POGLUT1Q8NBL1 392 aa13.18□□□□□ -0.3
GPN3-201ENST00000228827 OR5L2Q8NGL0 311 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms