RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 SLC5A10A0PJK1 596 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 SLC35F4A4IF30 521 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 FOXE1O00358 373 aaPredicted RBP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 CCL16O15467 120 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 IL7P13232 177 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 ZNF30P17039 623 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 VIPR1P32241 457 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 CTNNB1P35222 781 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 ETV3P41162 512 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 TAS2R50P59544 299 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 DSTNP60981 165 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 CAMK1Q14012 370 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 SLBPQ14493 270 aaKnown RBP eCLIP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 PUM1Q14671 1186 aaKnown RBP eCLIP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 GDPD4Q6W3E5 623 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 Q6ZVU0 165 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 NANOGNBQ7Z5D8 188 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 SLC30A8Q8IWU4 369 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 RASGEF1AQ8N9B8 481 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 PHOX2BQ99453 314 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 RIOK2Q9BVS4 552 aaKnown RBP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 MND1Q9BWT6 205 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 SLC46A2Q9BY10 475 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 NDEL1Q9GZM8 345 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 OR51B5Q9H339 312 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 NDOR1Q9UHB4 597 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 SLC25A13Q9UJS0 675 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 CXorf51AA0A1B0GTR3 108 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 A0A1W2PQ09 198 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 A0A1W2PRB8 838 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 HYKKA2RU49 373 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 SOX14O95416 240 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 TGFB1P01137 390 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 IGFBP1P08833 259 aaPredicted RBP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 SYN1P17600 705 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 CXCR2P25025 360 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 PSMA1P25786 263 aaKnown RBP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 TBPL1P62380 186 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 POLR2LP62875 67 aaKnown RBP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 MRPS15P82914 257 aaKnown RBP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 NCF4Q15080 339 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 IER5LQ5T953 404 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 C12orf73Q69YU5 71 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 CACTIN-AS1Q8N1I8 211 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 TRAM1L1Q8N609 369 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 ASCC1Q8N9N2 400 aaKnown RBP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 POF1BQ8WVV4 589 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 APOBEC4Q8WW27 367 aaKnown RBP16.64■□□□□ 0.25
PRPF19-201ENST00000227524 TIFAQ96CG3 184 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 DMRTB1Q96MA1 342 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 NDUFB11Q9NX14 153 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 GULP1Q9UBP9 304 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 TMEM98Q9Y2Y6 226 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 CMAHPQ9Y471 501 aa16.64■□□□□ 0.25
PRPF19-201ENST00000227524 TRANK1O15050 2925 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 CENPXA8MT69 81 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 QSOX1O00391 747 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 ZNF197O14709 1029 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 CYP2A6P11509 494 aaPredicted RBP16.63■□□□□ 0.25
PRPF19-201ENST00000227524 TGM4P49221 684 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 ZNF91Q05481 1191 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 ILKQ13418 452 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 CDK10Q15131 360 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 TBRG1Q3YBR2 411 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 RPS26P11Q5JNZ5 115 aaPredicted RBP16.63■□□□□ 0.25
PRPF19-201ENST00000227524 HENMT1Q5T8I9 393 aaKnown RBP16.63■□□□□ 0.25
PRPF19-201ENST00000227524 VASH1Q7L8A9 365 aaPredicted RBP16.63■□□□□ 0.25
PRPF19-201ENST00000227524 VN1R5Q7Z5H4 357 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 WDR53Q7Z5U6 358 aaPredicted RBP16.63■□□□□ 0.25
PRPF19-201ENST00000227524 C7orf61Q8IZ16 206 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 SLC6A18Q96N87 628 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 SMG9Q9H0W8 520 aaKnown RBP16.63■□□□□ 0.25
PRPF19-201ENST00000227524 TMCC3Q9ULS5 477 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 MYOFQ9NZM1 2061 aa16.63■□□□□ 0.25
PRPF19-201ENST00000227524 IQCMA0A1B0GVH7 501 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 MEIOCA2RUB1 952 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 LINC01553A4QN01 128 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 HMX3A6NHT5 357 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 WWP2O00308 870 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 TPST2O60704 377 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 ATG13O75143 517 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 CYP17A1P05093 508 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 HBQ1P09105 142 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 ITGB7P26010 798 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 PDHA2P29803 388 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 IRS1P35568 1242 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 RUNX1T1Q06455 604 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 TSTA3Q13630 321 aaPredicted RBP16.62■□□□□ 0.25
PRPF19-201ENST00000227524 LARS2Q15031 903 aaKnown RBP16.62■□□□□ 0.25
PRPF19-201ENST00000227524 SEC23BQ15437 767 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 REEP3Q6NUK4 255 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 FAM92BQ6ZTR7 304 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 NANOGP1Q8N7R0 232 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 FAM181AQ8N9Y4 354 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 ZNF480Q8WV37 535 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 MTERF3Q96E29 417 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 WDR34Q96EX3 536 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 FOPNLQ96NB1 174 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 TIGARQ9NQ88 270 aa16.62■□□□□ 0.25
PRPF19-201ENST00000227524 SNX11Q9Y5W9 270 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms