RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PAGE2Q7Z2X7 111 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 CUZD1Q86UP6 607 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 MMP21Q8N119 569 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 ZNF321PQ8N8H1 164 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 APCDD1LQ8NCL9 501 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 PTPMT1Q8WUK0 201 aaPredicted RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 CHTF18Q8WVB6 975 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 NCLNQ969V3 563 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 PPWD1Q96BP3 646 aaKnown RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 APIPQ96GX9 242 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 PKNOX2Q96KN3 472 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 ILKAPQ9H0C8 392 aaPredicted RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 CDCP1Q9H5V8 836 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 SLAMF7Q9NQ25 335 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 VTI1BQ9UEU0 232 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 ZNF223Q9UK11 482 aaPredicted RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 ADAM29Q9UKF5 820 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 FIS1Q9Y3D6 152 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 PTGDR2Q9Y5Y4 395 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 DYTNA2CJ06 578 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 WDR91A4D1P6 747 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
LSM5-201ENST00000223084 BPGMP07738 259 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 TNNI3P19429 210 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 GPR143P51810 404 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 TAS2R50P59544 299 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 RAE1P78406 368 aaKnown RBP11.83□□□□□ -0.52
LSM5-201ENST00000223084 IGLV3-21P80748 117 aaPredicted RBP11.83□□□□□ -0.52
LSM5-201ENST00000223084 ASPHQ12797 758 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 SERTAD2Q14140 314 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 MPP2Q14168 576 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 ELAVL1Q15717 326 aaKnown RBP11.83□□□□□ -0.52
LSM5-201ENST00000223084 ARL13AQ5H913 290 aaPredicted RBP11.83□□□□□ -0.52
LSM5-201ENST00000223084 ABHD17BQ5VST6 288 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 BEST3Q8N1M1 668 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 TMEM132CQ8N3T6 1108 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 GBP7Q8N8V2 638 aaPredicted RBP11.83□□□□□ -0.52
LSM5-201ENST00000223084 B3GNT7Q8NFL0 401 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 THAP3Q8WTV1 239 aaPredicted RBP11.83□□□□□ -0.52
LSM5-201ENST00000223084 TANKQ92844 425 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 TM4SF18Q96CE8 201 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 PGM2Q96G03 612 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 ZNF354BQ96LW1 612 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 WDR41Q9HAD4 459 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 KCNK9Q9NPC2 374 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 ANKRD10Q9NXR5 420 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 CLCA3PQ9Y6N3 262 aa11.83□□□□□ -0.52
LSM5-201ENST00000223084 SHANK1Q9Y566 2161 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
LSM5-201ENST00000223084 SVILO95425 2214 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 SERTM1A2A2V5 107 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 C17orf105B2RV13 164 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 TMEM233B4DJY2 109 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 H3BQF6 201 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 J3QKU1 62 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 AZIN1O14977 448 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 NPHS1O60500 1241 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 GPR75O95800 540 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 DDAH2O95865 285 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 UROSP10746 265 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 ALOX15P16050 662 aaPredicted RBP11.82□□□□□ -0.52
LSM5-201ENST00000223084 ARRB2P32121 409 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 STT3AP46977 705 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 SERPINB4P48594 390 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 CLCN2P51788 898 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 ACSM2AQ08AH3 577 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 TERF2Q15554 542 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 INPP5JQ15735 1006 aaPredicted RBP11.82□□□□□ -0.52
LSM5-201ENST00000223084 MEP1AQ16819 746 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 ZNF750Q32MQ0 723 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 SPDYAQ5MJ70 313 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 NDUFAF5Q5TEU4 345 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 CES4AQ5XG92 561 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 ACSM2BQ68CK6 577 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 CROCCP2Q86T23 111 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 RPS19BP1Q86WX3 136 aaKnown RBP11.82□□□□□ -0.52
LSM5-201ENST00000223084 CISD2Q8N5K1 135 aaKnown RBP11.82□□□□□ -0.52
LSM5-201ENST00000223084 SLC5A8Q8N695 610 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 OR1N1Q8NGS0 311 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 HAS2Q92819 552 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 C19orf60Q96EN9 201 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 VMP1Q96GC9 406 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 DGAT2Q96PD7 388 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 EBPLQ9BY08 206 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 DEFB126Q9BYW3 111 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 OR8D2Q9GZM6 311 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.82□□□□□ -0.52
LSM5-201ENST00000223084 LIN28AQ9H9Z2 209 aaKnown RBP11.82□□□□□ -0.52
LSM5-201ENST00000223084 SSU72Q9NP77 194 aaKnown RBP11.82□□□□□ -0.52
LSM5-201ENST00000223084 MAP10Q9P2G4 905 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 TEKT2Q9UIF3 430 aa11.82□□□□□ -0.52
LSM5-201ENST00000223084 PPIEQ9UNP9 301 aaKnown RBP11.82□□□□□ -0.52
LSM5-201ENST00000223084 MYO18BQ8IUG5 2567 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 GABRR3A8MPY1 467 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 HRKO00198 91 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 PCDH7O60245 1069 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 MYZAPP0CAP1 466 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 CD96P40200 585 aa11.81□□□□□ -0.52
LSM5-201ENST00000223084 ALDH9A1P49189 494 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms