RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ITGAMP11215 1152 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 ICAM2P13598 275 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 GRK2P25098 689 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 SLC1A6P48664 564 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 RAE1P78406 368 aaKnown RBP13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 FOLH1Q04609 750 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 STX3Q13277 289 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 EXT1Q16394 746 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 NDUFAF5Q5TEU4 345 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 VWA5B1Q5TIE3 1220 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 PLAG1Q6DJT9 500 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 TCTN3Q6NUS6 607 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 RIPOR1Q6ZS17 1223 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 MMP21Q8N119 569 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 SIRT6Q8N6T7 355 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 OR2T11Q8NH01 316 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 BRIX1Q8TDN6 353 aaKnown RBP13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 ZNF552Q9H707 407 aaPredicted RBP13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 PTGFRNQ9P2B2 879 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 MCM8Q9UJA3 840 aa13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 SMG1Q96Q15 3661 aaKnown RBP13.75□□□□□ -0.21
PCOLCE-201ENST00000223061 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 GUCY1B2O75343 617 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 SKAP2O75563 359 aaPredicted RBP13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 RSL1D1O76021 490 aaKnown RBP13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 TIA1P31483 386 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 SLC26A5P58743 744 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 BST1Q10588 318 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 NFATC3Q12968 1075 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 SERTAD2Q14140 314 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 NR6A1Q15406 480 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 UGT3A2Q3SY77 523 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 AGAP7PQ5VUJ5 663 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 OR52E8Q6IFG1 317 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 PTRH1Q86Y79 214 aaKnown RBP13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 ZNF781Q8N8C0 355 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 CDC26Q8NHZ8 85 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 TM4SF18Q96CE8 201 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 AGAP4Q96P64 663 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 ADAP2Q9NPF8 381 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 ZNF451Q9Y4E5 1061 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 CCL27Q9Y4X3 112 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 POLR3HQ9Y535 204 aaPredicted RBP13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 KALRNO60229 2985 aa13.74□□□□□ -0.21
PCOLCE-201ENST00000223061 A8MUI8 341 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 SEC22BO75396 215 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 ANXA4P09525 319 aaPredicted RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 TNNI3P19429 210 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 ALDH9A1P49189 494 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 TAS2R50P59544 299 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 ELAVL1Q15717 326 aaKnown RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 LINC00696Q6ZRV3 163 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 KIF2BQ8N4N8 673 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 M1APQ8TC57 530 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 SMAD5Q99717 465 aaKnown RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 KCNK13Q9HB14 408 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 LRTM1Q9HBL6 345 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 ZBTB20Q9HC78 741 aaPredicted RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 C5AR2Q9P296 337 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 VTI1BQ9UEU0 232 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 CLCA3PQ9Y6N3 262 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 MED13Q9UHV7 2174 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 KLHL41O60662 606 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 GPR75O95800 540 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 IL3P08700 152 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 AP2B1P63010 937 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 COLEC12Q5KU26 742 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 B3GNTL1Q67FW5 361 aaPredicted RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 JMJD6Q6NYC1 403 aaPredicted RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 GALNT18Q6P9A2 607 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 Q6ZSR9 355 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 NFAM1Q8NET5 270 aaPredicted RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 DNAJB14Q8TBM8 379 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 C16orf78Q8WTQ4 265 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 PSMF1Q92530 271 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 PPWD1Q96BP3 646 aaKnown RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 C11orf24Q96F05 449 aaPredicted RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 DGAT2Q96PD7 388 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 SORT1Q99523 831 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 FAIM2Q9BWQ8 316 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 ILKAPQ9H0C8 392 aaPredicted RBP13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 MMP25Q9NPA2 562 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 C1orf109Q9NX04 203 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 DLGAP4Q9Y2H0 992 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 RAP2CQ9Y3L5 183 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 PCDHA9Q9Y5H5 950 aa13.73□□□□□ -0.21
PCOLCE-201ENST00000223061 A0A1W2PS29 197 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 SYNDIG1LA6NDD5 238 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 C17orf105B2RV13 164 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 EBAG9O00559 213 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 NDUFAB1O14561 156 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 OR10H2O60403 315 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 FAM107AO95990 144 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 ALOX15P16050 662 aaPredicted RBP13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 STT3AP46977 705 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 TRA2BP62995 288 aaKnown RBP13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 IGLV3-21P80748 117 aaPredicted RBP13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 PLIN5Q00G26 463 aa13.72□□□□□ -0.21
PCOLCE-201ENST00000223061 PDCD2Q16342 344 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms