RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 ALDH9A1P49189 494 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 PRLHRP49683 370 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 PSPHP78330 225 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 FAM131AQ6UXB0 335 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 ZSCAN5AQ9BUG6 496 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 ACAT2Q9BWD1 397 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 NLNQ9BYT8 704 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 SRRQ9GZT4 340 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 ABCB9Q9NP78 766 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 NPAP1Q9NZP6 1156 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 STUB1Q9UNE7 303 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 MEIOCA2RUB1 952 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 TEX28O15482 410 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 MYCP01106 439 aaPredicted RBP17.61■□□□□ 0.41
CACTIN-201ENST00000221899 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.61■□□□□ 0.41
CACTIN-201ENST00000221899 DCST1Q5T197 706 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 BRAT1Q6PJG6 821 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 TMIGD1Q6UXZ0 262 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 HMGN2P46Q86SG4 172 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 OR9Q1Q8NGQ5 310 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 AP2M1Q96CW1 435 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 TMEM19Q96HH6 336 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 NRTNQ99748 197 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 TVP23BQ9NYZ1 205 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 SEC14L4Q9UDX3 406 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 KCND3Q9UK17 655 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 CMAHPQ9Y471 501 aa17.61■□□□□ 0.41
CACTIN-201ENST00000221899 CENPXA8MT69 81 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 ZNF670-ZNF695F2Z2N8 137 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 GUCY1B2O75343 617 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 TIMP2P16035 220 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 WEE1P30291 646 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 SSTR4P31391 388 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 SLC7A9P82251 487 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 TARDBPQ13148 414 aaKnown RBP eCLIP17.6■□□□□ 0.41
CACTIN-201ENST00000221899 OR4D11Q8NGI4 311 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 IL17FQ96PD4 163 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 DEPDC7Q96QD5 511 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 SLC46A2Q9BY10 475 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 POLR2J3Q9H1A7 115 aaKnown RBP17.6■□□□□ 0.41
CACTIN-201ENST00000221899 SLAMF7Q9NQ25 335 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 PLAGL1Q9UM63 463 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 YARS2Q9Y2Z4 477 aaKnown RBP17.6■□□□□ 0.41
CACTIN-201ENST00000221899 PCDHGB2Q9Y5G2 931 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 PLXND1Q9Y4D7 1925 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 TRAV19A0A0A6YYK7 116 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 MYL12BO14950 172 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 UGT2B17O75795 530 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 ADAP00813 363 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 CSF2P04141 144 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 HNRNPA0Q13151 305 aaKnown RBP17.6■□□□□ 0.41
CACTIN-201ENST00000221899 GRIN2CQ14957 1233 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 LARS2Q15031 903 aaKnown RBP17.6■□□□□ 0.41
CACTIN-201ENST00000221899 HIST2H2AA3Q6FI13 130 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 C22orf42Q6IC83 251 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 TCTN3Q6NUS6 607 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 OLIG3Q7RTU3 272 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 TIFAQ96CG3 184 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 EFCAB11Q9BUY7 163 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 MND1Q9BWT6 205 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 FZD3Q9NPG1 666 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 SSR3Q9UNL2 185 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 GRIP1Q9Y3R0 1128 aa17.6■□□□□ 0.41
CACTIN-201ENST00000221899 FAM172BPA6NC97 362 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 HEPACAM2A8MVW5 462 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 FOXE1O00358 373 aaPredicted RBP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 TLX2O43763 284 aaPredicted RBP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 CTSLP07711 333 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 SRPRAP08240 638 aaKnown RBP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 CXCR2P25025 360 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 DGKGP49619 791 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 DCDC1P59894 354 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 SNRPGP62308 76 aaKnown RBP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 PCDH1Q08174 1060 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 HSPB3Q12988 150 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 PHC2Q8IXK0 858 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 GALNT12Q8IXK2 581 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 ASCC1Q8N9N2 400 aaKnown RBP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 SETD6Q8TBK2 473 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 APOBEC4Q8WW27 367 aaKnown RBP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 MVB12BQ9H7P6 319 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 SEMA3GQ9NS98 782 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 CARD8Q9Y2G2 431 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 HYKKA2RU49 373 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 POLR2EP19388 210 aaKnown RBP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 UQCRC2P22695 453 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 LSM11P83369 360 aaKnown RBP eCLIP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 TMEM215Q68D42 235 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 ERAP2Q6P179 960 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 USP30Q70CQ3 517 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 SZRD1Q7Z422 152 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 TRMT11Q7Z4G4 463 aaKnown RBP17.59■□□□□ 0.41
CACTIN-201ENST00000221899 C11orf74Q86VG3 221 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 TRIM69Q86WT6 500 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 TRAPPC5Q8IUR0 188 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 KLHDC8AQ8IYD2 350 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 NANOGP1Q8N7R0 232 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 SLC5A11Q8WWX8 675 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 NDUFB11Q9NX14 153 aa17.59■□□□□ 0.41
CACTIN-201ENST00000221899 PAQR5Q9NXK6 330 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms