RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PKP4Q99569 1192 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 TSNAXQ99598 290 aaKnown RBP14.01□□□□□ -0.17
PTPRA-201ENST00000216877 OSMRQ99650 979 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 TREX2Q9BQ50 279 aaPredicted RBP14.01□□□□□ -0.17
PTPRA-201ENST00000216877 MRIQ9BWK5 157 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 GABARAPL1Q9H0R8 117 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 BIN3Q9NQY0 253 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 PDGFCQ9NRA1 345 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 A0A0G2JMZ2 1700 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 LRRC37A2A6NM11 1700 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 TXNL1O43396 289 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 OR10H3O60404 316 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 CTSHP09668 335 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 HK3P52790 923 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 TNFRSF17Q02223 184 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 FAHD1Q6P587 224 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 MIB1Q86YT6 1006 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 RBFAQ8N0V3 343 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 NKAPQ8N5F7 415 aaKnown RBP14.01□□□□□ -0.17
PTPRA-201ENST00000216877 SAMD12Q8N8I0 201 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 OR4K2Q8NGD2 314 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 GANCQ8TET4 914 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 RAD9AQ99638 391 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 PDCD10Q9BUL8 212 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 NLGN3Q9NZ94 848 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 E2F3O00716 465 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 GPR182O15218 404 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 TPST2O60704 377 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 S100A6P06703 90 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 PCSK2P16519 638 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 GABRB1P18505 474 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 CELP19835 753 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 RAET1GQ6H3X3 334 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 LRRN1Q6UXK5 716 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 TFAP2EQ6VUC0 442 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 LHFPL3Q86UP9 236 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 TOMM5Q8N4H5 51 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 TEX47Q8TBZ9 253 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 ZNF382Q96SR6 550 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 SEMA3CQ99985 751 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 NFKBIZQ9BYH8 718 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 FZD8Q9H461 694 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 GPR160Q9UJ42 338 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 BRCA2P51587 3418 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 LOC285095A0A1B0GVY8 99 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 ANXA2P2A6NMY6 339 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 MAGEB17A8MXT2 336 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 TFP02787 698 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 SYN1P17600 705 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 PBX3P40426 434 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 CAPZA1P52907 286 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 ZNF91Q05481 1191 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 MBTD1Q05BQ5 628 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 XRRA1Q6P2D8 792 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 NEIL3Q8TAT5 605 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 ING5Q8WYH8 240 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 TCEAL3Q969E4 200 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 SMIM14Q96QK8 99 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 QRSL1Q9H0R6 528 aaKnown RBP14□□□□□ -0.17
PTPRA-201ENST00000216877 KCNH6Q9H252 994 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 PTGFRNQ9P2B2 879 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 PCOLCE2Q9UKZ9 415 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 MAFKO60675 156 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 GADD45GO95257 159 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 SYT12Q8IV01 421 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 PDZD9Q8IXQ8 264 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 MEIOBQ8N635 442 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 OR2T4Q8NH00 348 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 DERL2Q9GZP9 239 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 ESRP2Q9H6T0 727 aaKnown RBP14□□□□□ -0.17
PTPRA-201ENST00000216877 OR10H1Q9Y4A9 318 aa14□□□□□ -0.17
PTPRA-201ENST00000216877 GABRR3A8MPY1 467 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 GPR171O14626 319 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 TSPAN12O95859 305 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 VASNQ6EMK4 673 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 ZNF730Q6ZMV8 503 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 GDPGP1Q6ZNW5 385 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 LNX2Q8N448 690 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 WDR20Q8TBZ3 569 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 KLRG1Q96E93 195 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 SLC38A3Q99624 504 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 CDCA4Q9BXL8 241 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 FZD4Q9ULV1 537 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 PCDHGA2Q9Y5H1 932 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 LOC730098B7Z3J9 87 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 MT-ND4P03905 459 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 ADRB1P08588 477 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 H2AFB2P0C5Z0 115 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 S100A12P80511 92 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 LYPD4Q6UWN0 246 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 ZNF551Q7Z340 670 aaPredicted RBP13.99□□□□□ -0.17
PTPRA-201ENST00000216877 RASGRP3Q8IV61 690 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 SLC30A8Q8IWU4 369 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 FCRL2Q96LA5 508 aaPredicted RBP13.99□□□□□ -0.17
PTPRA-201ENST00000216877 C1orf74Q96LT6 269 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 SLC38A2Q96QD8 506 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 MGAT4CQ9UBM8 478 aa13.99□□□□□ -0.17
PTPRA-201ENST00000216877 ZFR2Q9UPR6 939 aaKnown RBP13.99□□□□□ -0.17
PTPRA-201ENST00000216877 GPR39O43194 453 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms