RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MRPL17Q9NRX2 175 aaKnown RBP13.35□□□□□ -0.27
USH1C-201ENST00000005226 TOR4AQ9NXH8 423 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 PLAGL1Q9UM63 463 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 CCL26Q9Y258 94 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 ANGPT4Q9Y264 503 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 PLXND1Q9Y4D7 1925 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 A0A1W2PRU2 124 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 PRKYO43930 277 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 TMCC2O75069 709 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 CSF3P09919 207 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 MSL3P1P0C860 447 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 OSMP13725 252 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 ETV5P41161 510 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 ETV1P50549 477 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 XKP51811 444 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 TEKQ02763 1124 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 TARDBPQ13148 414 aaKnown RBP eCLIP13.35□□□□□ -0.27
USH1C-201ENST00000005226 KCNC3Q14003 757 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 USP30Q70CQ3 517 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 SHFQ7M4L6 423 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 HOMEZQ8IX15 550 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 CFAP206Q8IYR0 622 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 MAGEB10Q96LZ2 347 aaPredicted RBP13.35□□□□□ -0.27
USH1C-201ENST00000005226 C19orf43Q9BQ61 176 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 POLR2J3Q9H1A7 115 aaKnown RBP13.35□□□□□ -0.27
USH1C-201ENST00000005226 DMRT3Q9NQL9 472 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 TAAR2Q9P1P5 351 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 GULP1Q9UBP9 304 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 TMCC3Q9ULS5 477 aa13.35□□□□□ -0.27
USH1C-201ENST00000005226 PIPSLA2A3N6 862 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 FABP12A6NFH5 140 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 ZNF670-ZNF695F2Z2N8 137 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 ZNF197O14709 1029 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 LEFTY1O75610 366 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 WEE1P30291 646 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 SDC2P34741 201 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 DDOSTP39656 456 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 RHAGQ02094 409 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 ATAT1Q5SQI0 421 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 CASP12Q6UXS9 341 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 COMTD1Q86VU5 262 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 KRT73Q86Y46 540 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 NANOGP1Q8N7R0 232 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 OR2A12Q8NGT7 310 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 TMEM19Q96HH6 336 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 TM9SF2Q99805 663 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 MRPL9Q9BYD2 267 aaKnown RBP13.34□□□□□ -0.27
USH1C-201ENST00000005226 MIEF1Q9NQG6 463 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 TXNL4BQ9NX01 149 aaKnown RBP13.34□□□□□ -0.27
USH1C-201ENST00000005226 STUB1Q9UNE7 303 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 SSR3Q9UNL2 185 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 GRIP1Q9Y3R0 1128 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 HMX3A6NHT5 357 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 WASHC1A8K0Z3 465 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 C5orf58C9J3I9 102 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 LATS1O95835 1130 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 IFNA14P01570 189 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 ELAVL4P26378 380 aaKnown RBP13.34□□□□□ -0.27
USH1C-201ENST00000005226 TMEM115Q12893 351 aaPredicted RBP13.34□□□□□ -0.27
USH1C-201ENST00000005226 PYDC2Q56P42 97 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 TOR1AIP1Q5JTV8 583 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 DCST1Q5T197 706 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 REEP3Q6NUK4 255 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 LYPD8Q6UX82 237 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 WASH2PQ6VEQ5 465 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 FZD3Q9NPG1 666 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 NPAP1Q9NZP6 1156 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 SEC14L4Q9UDX3 406 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 PLEKHB1Q9UF11 243 aaPredicted RBP13.34□□□□□ -0.27
USH1C-201ENST00000005226 SPIN1Q9Y657 262 aaPredicted RBP13.34□□□□□ -0.27
USH1C-201ENST00000005226 DSPPQ9NZW4 1301 aa13.34□□□□□ -0.27
USH1C-201ENST00000005226 SLC5A10A0PJK1 596 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 B4GALT2O60909 372 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 NTN1O95631 604 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 EFEMP2O95967 443 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 CTSAP10619 480 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 PCSK2P16519 638 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 CD79BP40259 229 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 KIR2DL3P43628 341 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 HSPB3Q12988 150 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 SZRD1Q7Z422 152 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 SLC7A6Q92536 515 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 TMEM169Q96HH4 297 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 RNF170Q96K19 258 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 LMLNQ96KR4 655 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 PRR14Q9BWN1 585 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 RACGAP1Q9H0H5 632 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 HS3ST2Q9Y278 367 aa13.33□□□□□ -0.27
USH1C-201ENST00000005226 HYKKA2RU49 373 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 CCDC182A6NF36 153 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 NOTOA8MTQ0 251 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 B4DXG7 233 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 M0R3H8 397 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 LEFTY2O00292 366 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 MYL12BO14950 172 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 MPZL2O60487 215 aa13.33□□□□□ -0.28
USH1C-201ENST00000005226 C1orf105O95561 183 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms