RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Amigo2Q80ZD9 519 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Klf8Q8BLM0 355 aaKnown RBP10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gpr22Q8BZL4 432 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Twist2Q9D030 160 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 D7h11orf16Q9JJR6 402 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Bag6Q9Z1R2 1154 aaKnown RBP10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Atxn1P54254 791 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 UbdP63072 162 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm5127Q3UQH6 212 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr814Q7TRH4 310 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1395Q8VGD7 317 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Necab3Q9D6J4 353 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tas2r123P59528 333 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tmem69Q3KQJ0 245 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cdk10Q3UMM4 360 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Usp17laQ61068 526 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ddx4Q61496 702 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Txnl4bQ8BUH1 149 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Adamts2Q8C9W3 1213 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Q8CF31 99 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Mrps28Q9CY16 186 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Arfgap3Q9D8S3 523 aa10.07□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Lrrc3P59034 257 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gas1Q01721 343 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pag1Q3U1F9 429 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cpxcr1Q3V0P1 322 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ssr4Q62186 172 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ube2j2Q6P073 259 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 TmlheQ91ZE0 421 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ppp2r2dQ925E7 453 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gde1Q9JL56 331 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Mtm1Q9Z2C5 603 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc22a28B2RT89 552 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Prps1l3G3UXL2 318 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm6614M0QWR8 670 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cldn5O54942 218 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 CcnkO88874 554 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Il10raQ61727 575 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Trim24Q64127 1051 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Usf2Q64705 346 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Kiss1Q6Y4S4 130 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc22a30Q96LX3 552 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 AdprmQ99KS6 340 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Prps1Q9D7G0 318 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 PrelpQ9JK53 378 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Psma6Q9QUM9 246 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Fignl2J3QK54 644 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Chrm1P12657 460 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Defb23Q30KP0 166 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cpa6Q5U901 438 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Eri3Q8C460 337 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Utp15Q8C7V3 528 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cdh10P70408 788 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Itpripl2Q3UV16 535 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pcsk7Q61139 770 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Trnt1Q8K1J6 434 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1325Q8VF43 315 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr617Q8VGA1 318 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc27a4Q91VE0 643 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ankrd54Q91WK7 299 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Clic3Q9D7P7 237 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Fundc1Q9DB70 155 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc38a3Q9DCP2 505 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Robo3Q9Z2I4 1366 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc37a4A0A1L1SUI3 450 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zfp808B8JJZ4 753 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rnf130Q8VEM1 419 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vmn1r71Q8VIC0 307 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zdhhc7Q91WU6 308 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Dbf4Q9QZ41 663 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 ItgamP05555 1153 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Creb1Q01147 341 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Hp1bp3Q3TEA8 554 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 ArhgdibQ61599 200 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tigd3Q7TM95 470 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1045Q7TR80 315 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cntn6Q9JMB8 1028 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Vmn2r48E9Q5D8 855 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Papss2O88428 621 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 EdnraQ61614 427 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Lrrtm2Q8BGA3 515 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Yipf4Q8C407 246 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr134Q8VG95 312 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Nudt7Q99P30 236 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Fam96bQ9D187 163 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Yae1d1Q9DAY6 216 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rrp8Q9DB85 457 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rsc1a1Q9ER99 582 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 IvdQ9JHI5 424 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 PatjQ63ZW7 1834 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Spire1Q52KF3 598 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gpr75Q6X632 540 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Med26Q7TN02 588 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cox15Q8BJ03 413 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr516Q8VFZ5 314 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Sntg1Q925E1 517 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Lat2Q9JHL0 203 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Eny2Q9JIX0 101 aaKnown RBP10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Lcn11A2BHR2 178 aa10.06□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zfp81B8JJZ7 531 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms