RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Gdi2Q61598 445 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Fam76bQ80XP8 339 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Itih5Q8BJD1 952 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 StgQ8BM15 349 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Plekhs1Q8BW88 474 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Imp4Q8VHZ7 291 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Itgb3bpQ9CQ82 176 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cdc40Q9DC48 579 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Clca3a2Q9EQR4 902 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Clca3a1Q9QX15 902 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tyk2Q9R117 1184 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Gm597E9Q8J5 896 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Capn5O08688 640 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Rnf13O54965 381 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 DdcO88533 480 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Rplp0P14869 317 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Gja1P23242 382 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cyp2a12P56593 492 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ephx3Q3V1F8 367 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tead4Q62296 427 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Smad2Q62432 467 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tmem151aQ6GQT5 468 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Eci3Q78JN3 317 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Trnp1Q80ZI1 223 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Flrt2Q8BLU0 660 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Paip1Q8VE62 400 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tas1r1Q99PG6 842 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Atg12Q9CQY1 141 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tmem135Q9CYV5 458 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cir1Q9DA19 450 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr520E9Q518 316 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Rab11fip2G3XA57 512 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Scarb2O35114 478 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Gnao1P18872 354 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Capza1P47753 286 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Slc22a15Q504N2 544 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Adgre1Q61549 931 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 HlxQ61670 476 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Sort1Q6PHU5 825 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cd300aQ6SJQ0 318 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 CblcQ80XL1 496 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Gjc2Q8BQU6 440 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Dcun1d3Q8K0V2 304 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr651Q8VG78 313 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Prdm9Q96EQ9 843 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 AmnQ99JB7 458 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Kdelr2Q9CQM2 212 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Fndc8Q9D2H8 321 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Sacm1lQ9EP69 587 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 CasrQ9QY96 1079 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Gm4775F7ANJ3 135 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Matn1P51942 500 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Wnt8aQ64527 354 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Timmdc1Q8BUY5 285 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ston2Q8BZ60 895 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr846Q8VET8 312 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 HnrnpllQ921F4 591 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Dusp13Q9QYJ7 198 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Scnn1gQ9WU39 655 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ascc3E9PZJ8 2198 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 4930402K13RikB1AW18 415 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Hnf1bP27889 558 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Fv1P70213 459 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Adam5Q3TTE0 751 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Pwwp2aQ69Z61 730 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tmed3Q78IS1 221 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tas2r117Q7M715 330 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tram1l1Q8QZR0 363 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Mettl22Q8R1C6 393 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr1090Q8VGA6 313 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Oas3Q8VI93 1138 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Pcdhac2Q91Y09 1006 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Adgrl4Q923X1 739 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Plpp3Q99JY8 312 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cmtm3Q99LJ5 184 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 9530002B09RikQ9EPV7 135 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Arr3Q9EQP6 381 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Dclk1Q9JLM8 756 aa9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Akap8lQ9R0L7 642 aaKnown RBP9.47□□□□□ -0.89
Syne1-201ENSMUST00000041639 Med1Q925J9 1575 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr396-ps1A0A0U1RNF5 211 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr74A2BHP6 318 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Mterf1bB9EJ57 379 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Olfr640E9Q7P5 314 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 H2-M11F6U8V3 335 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Gm16434J3QN10 205 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 4930555G01RikL7N253 205 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Gstm3P19639 218 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Hoxd13P70217 339 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 SgcdP82347 289 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Tmem102Q3UPR7 509 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Commd6Q3V4B5 87 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Cachd1Q6PDJ1 1288 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Ube2q1Q7TSS2 422 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Sall4Q8BX22 1067 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Mterf1aQ8CHZ9 379 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Dap3Q9ER88 391 aaKnown RBP9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Unc13cQ8K0T7 2210 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 Vmn2r84D3YWE3 849 aa9.46□□□□□ -0.89
Syne1-201ENSMUST00000041639 CcnkO88874 554 aa9.46□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms