RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Olfr1375A0A0N4SUP0 313 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Acss3Q14DH7 682 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Commd3Q63829 195 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Lrrtm2Q8BGA3 515 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Fam210aQ8BGY7 273 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 PxkQ8BX57 582 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Tram1l1Q8QZR0 363 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Gpn2Q8VEJ1 310 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Scgb3a1Q920D7 104 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 NmuQ9QXK8 174 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Lrrc72A0A1Y7VMI0 288 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 4930544D05RikJ3QK56 214 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Snrpd2P62317 118 aaKnown RBP13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 CrxosQ3UL53 246 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Pnliprp1Q5BKQ4 473 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Sntb2Q61235 520 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Slc36a1Q8K4D3 475 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Glis2Q8VDL9 521 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Q91W34 466 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Cdca3Q99M54 266 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr710Q9EP55 310 aa13.47□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Fthl17bA2AHC5 176 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Fthl17cA2AHC6 176 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Gm5519D3Z175 170 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 SpnP15702 395 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Fthl17dQ3SXD1 176 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Fthl17fQ3SXD2 176 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Epha6Q62413 1035 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 DgkbQ6NS52 802 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 B3glctQ8BHT6 489 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 SynbQ8BI41 618 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Atg10Q8R1P4 215 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Snapc5Q8R2K7 98 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr1309Q8VF83 320 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Lnx2Q91XL2 687 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Rnf144aQ925F3 292 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Fthl17Q99MX2 176 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Vmn2r45L7N2B5 852 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Stc1O55183 247 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Kcnh6Q32ME0 950 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Cdk6Q64261 326 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Ntan1Q64311 310 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Srd5a1Q68FF9 255 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Fcrl5Q68SN8 596 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr735Q7TRM4 354 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 PgghgQ8BP56 690 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Prrt4B2RU40 902 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Arhgap40E9Q6X9 672 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Cbr1P48758 277 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Itm2aQ61500 263 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Lasp1Q61792 263 aaKnown RBP13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 CilpQ66K08 1184 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Zfp759Q7M6X3 721 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Clec2eQ80XD9 204 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 IlvblQ8BU33 632 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Ptges2Q8BWM0 384 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Adgrg2Q8CJ12 1009 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr307Q8VFN8 313 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 EtfaQ99LC5 333 aaKnown RBP13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Znhit2Q9QY66 399 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Vmn2r114E9Q281 856 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Phox2aQ62066 280 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Q6P1I3 445 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Slitrk5Q810B7 957 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Lrrc19Q8BZT5 364 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Ppp1r8Q8R3G1 351 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 9030624G23RikQ9D308 155 aa13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Ahnak2E9PYB0 1738 aaKnown RBP13.46□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Gm5678A0A1B0GRG8 277 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Chrna4O70174 629 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 ShdO88834 343 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cox4i1P19783 169 aaKnown RBP13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Acta2P62737 377 aaKnown RBP13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Actg2P63268 376 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Irf7P70434 457 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cdk18Q04899 451 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr1136Q0VBI4 310 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 UevldQ3U1V6 471 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 TefmQ5SSK3 364 aaKnown RBP13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Cd53Q61451 219 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Kyat1Q8BTY1 424 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Padi6Q8K3V4 682 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 B4galt5Q9JMK0 388 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Dnmt3aO88508 908 aaKnown RBP13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Msx1P13297 303 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Zfp60P16374 707 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Aqp2P56402 271 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Actc1P68033 377 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Acta1P68134 377 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Olfr1310Q8VF85 312 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Glod4Q9CPV4 298 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Bcas2Q9D287 225 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Agpat3Q9D517 376 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Asf1bQ9DAP7 202 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Smco4Q9JIS3 59 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Gsk3bQ9WV60 420 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Gm3543D3Z235 184 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Hsd11b2P51661 386 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 Gls2Q571F8 602 aa13.46□□□□□ -0.26
Col5a1-201ENSMUST00000028280 LpoQ5SW46 710 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms