RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm16440K7N6G6 218 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm8271L7N2E2 218 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Mup3P04939 184 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 OstnP61364 130 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 YwhahP68510 246 aaKnown RBP16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Marveld1Q7TQJ1 173 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Adamtsl4Q80T21 1036 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Prr5Q812A5 387 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Zc3h14Q8BJ05 735 aaKnown RBP16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Nceh1Q8BLF1 408 aaKnown RBP16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Samd3Q8C4H2 520 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Krtcap3Q8K177 240 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 TipinQ91WA1 278 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 EbplQ9D0P0 206 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dcbld1Q9D4J3 503 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Bnip3lQ9Z2F7 218 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm17190V9GX38 357 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dcdc2bF7BCK0 340 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Mapk1P63085 358 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Polr2mQ6P6I6 366 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Glt28d2Q8BML3 165 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tctn1Q8BZ64 593 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cdc123Q8CII2 336 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Coq9Q8K1Z0 313 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Slc35b3Q922Q5 369 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Man2b1O09159 1013 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Etv1P41164 477 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dcp1bQ3U564 578 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Lcn3Q62471 182 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gemin8Q8BHE1 238 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Nlrp10Q8CCN1 673 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Hbp1Q8R316 516 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Klk6Q91Y82 253 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Hspa14Q99M31 509 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Etv5Q9CXC9 510 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Prelid3bQ9CYY7 195 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Uba7Q9DBK7 977 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr1306A2BFL7 312 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cped1B2RX70 1026 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr619E9PV95 320 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Vmn2r118E9Q1C1 853 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Adamts3E9Q287 1204 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 OgdhlE9Q7L0 1029 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Uimc1Q5U5Q9 727 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Egfl8Q6GUQ1 293 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Mapre3Q6PER3 281 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Trim46Q7TNM2 759 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Plekha4Q8VC98 588 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Nphs2Q91X05 385 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Zbtb8aQ9CWH1 434 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 GabrqQ9JLF1 638 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Fads2Q9Z0R9 444 aaKnown RBP16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cldn9Q9Z0S7 217 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Rasal1Q9Z268 799 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Scn5aQ9JJV9 2019 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dmrtb1A2A9I7 359 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm13088A2AGW6 460 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Pgbd5D3YZI9 523 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm7945F6QI24 236 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gtpbp1O08582 668 aaKnown RBP16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Rpl7P14148 270 aaKnown RBP16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Il1rnP25085 178 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Pou2f1P25425 770 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ap2m1P84091 435 aaKnown RBP16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 MeikinQ5F2C3 434 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Slc44a5Q5RJI2 710 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Laptm4aQ60961 233 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Slc25a32Q8BMG8 316 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Fam92aQ8BP22 355 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Atp6v1hQ8BVE3 483 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dync2li1Q8K0T2 351 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tmem242Q8VCR3 140 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr656Q8VGX9 329 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cthrc1Q9D1D6 245 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ppa1Q9D819 289 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Eif3kQ9DBZ5 218 aa16.1■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Btnl4A2CG29 586 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Crisp4E9PVG4 293 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tmigd3G3X8R9 209 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Kcnk1O08581 336 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Prkag1O54950 330 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Rc3h2P0C090 1187 aaKnown RBP16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 DcnP28654 354 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Snrpd2P62317 118 aaKnown RBP16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Smpdl3aP70158 445 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Pou4f2Q63934 411 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 DgkbQ6NS52 802 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tmem184bQ8BG09 407 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Rbm45Q8BHN5 476 aaKnown RBP16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Smoc1Q8BLY1 463 aaKnown RBP16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 PigzQ8BTP0 560 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tnfsfm13Q8BXS2 410 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Abhd18Q8C1A9 464 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 P3h2Q8CG71 703 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Anapc10Q8K2H6 185 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Spns1Q8R0G7 528 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Vmn1r203Q8R273 311 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cyp4a32A2A8T1 509 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Zfp735B1ARH2 734 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm13212B1ASQ7 799 aa16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms