RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ZNF45Q02386 682 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 PARS2Q7L3T8 475 aaKnown RBP13.91□□□□□ -0.18
SCARB2-221ENST00000640341 LAX1Q8IWV1 398 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 OR9Q1Q8NGQ5 310 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 SLC38A5Q8WUX1 472 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 TIFAQ96CG3 184 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 SLC30A2Q9BRI3 323 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 POLR2J3Q9H1A7 115 aaKnown RBP13.91□□□□□ -0.18
SCARB2-221ENST00000640341 TDP1Q9NUW8 608 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 TAAR2Q9P1P5 351 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 SEC14L3Q9UDX4 400 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 BOLA1Q9Y3E2 137 aa13.91□□□□□ -0.18
SCARB2-221ENST00000640341 M0R3H8 397 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 TAF4O00268 1085 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 FFAR1O14842 300 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 SLC28A2O43868 658 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 SYN1P17600 705 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PRLHRP49683 370 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 OR2B6P58173 313 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 SSX1Q16384 188 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 DCST1Q5T197 706 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 NXNL2Q5VZ03 156 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 SHFQ7M4L6 423 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 KIAA1958Q8N8K9 716 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 VN1R2Q8NFZ6 395 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PRR14Q9BWN1 585 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 YIPF2Q9BWQ6 316 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 RNF208Q9H0X6 261 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 SP140LQ9H930 580 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 ABCB9Q9NP78 766 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 CARD8Q9Y2G2 431 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PCM1Q15154 2024 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PPM1DO15297 605 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 FGF18O76093 207 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 AP2A2O94973 939 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 SNX4O95219 450 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 KRT75O95678 551 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 UGT2B10P36537 528 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 FCHO2Q0JRZ9 810 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 MESP2Q0VG99 397 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 ZNF630Q2M218 657 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-221ENST00000640341 FBXO43Q4G163 708 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PLPP4Q5VZY2 271 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PLAG1Q6DJT9 500 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 REEP3Q6NUK4 255 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 OR9A1PQ8NGU1 263 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 OTULINQ96BN8 352 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 SLAMF7Q9NQ25 335 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 MALT1Q9UDY8 824 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PCDHGA3Q9Y5H0 932 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 KIAA0100Q14667 2235 aaKnown RBP13.9□□□□□ -0.18
SCARB2-221ENST00000640341 ISPDA4D126 451 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 ANTXRLA6NF34 631 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 WASH3PC4AMC7 463 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 H7BY64 318 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PRKRAO75569 313 aaKnown RBP13.9□□□□□ -0.18
SCARB2-221ENST00000640341 CSF2P04141 144 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 CASP3P42574 277 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 XKP51811 444 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 RUNX1T1Q06455 604 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 ZNF805Q5CZA5 627 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 NEK10Q6ZWH5 1172 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 ZFP41Q8N8Y5 198 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 FAM46DQ8NEK8 389 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 ZFYVE19Q96K21 471 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PRAP1Q96NZ9 151 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 EFCAB11Q9BUY7 163 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 TP63Q9H3D4 680 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-221ENST00000640341 NEK6Q9HC98 313 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 PLCXD1Q9NUJ7 323 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 CFL2Q9Y281 166 aa13.9□□□□□ -0.18
SCARB2-221ENST00000640341 NUMA1Q14980 2115 aa13.9□□□□□ -0.19
SCARB2-221ENST00000640341 ANHXE9PGG2 379 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 MYL12BO14950 172 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 LATO43561 262 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 EFEMP2O95967 443 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 CTSAP10619 480 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 GABRB1P18505 474 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 NXPE4Q6UWF7 544 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 HOMEZQ8IX15 550 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 PXYLP1Q8TE99 480 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 TRMT61AQ96FX7 289 aaKnown RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 CUEDC1Q9NWM3 386 aaPredicted RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 MUTYHQ9UIF7 546 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 GPR52Q9Y2T5 361 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 YARS2Q9Y2Z4 477 aaKnown RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 NPIPB8E9PQR5 432 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 ERAL1O75616 437 aaKnown RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 RHCEP18577 417 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 PSMA1P25786 263 aaKnown RBP13.89□□□□□ -0.19
SCARB2-221ENST00000640341 ST8SIA6P61647 398 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 SPHARQ15513 63 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 SYPL1Q16563 259 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 PRAMEF14Q5SWL7 426 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 PRAMEF13Q5VWM6 474 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 FAM71E1Q6IPT2 247 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 LINC00299Q6ZSB3 139 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 SPATA9Q9BWV2 254 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 UCK2Q9BZX2 261 aa13.89□□□□□ -0.19
SCARB2-221ENST00000640341 MMP28Q9H239 520 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms