RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 IL3P08700 152 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 COX6A1P12074 109 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 ACPPP15309 386 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 TACR1P25103 407 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 PPP2R1BP30154 601 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 TLX1P31314 330 aaPredicted RBP12.39□□□□□ -0.43
GTF3A-209ENST00000640289 TRA2BP62995 288 aaKnown RBP12.39□□□□□ -0.43
GTF3A-209ENST00000640289 GUCY1A3Q02108 690 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 PCOLCEQ15113 449 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 C6orf136Q5SQH8 315 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 VWA5B1Q5TIE3 1220 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 CPZQ66K79 652 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 MAVSQ7Z434 540 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 KIRREL3Q8IZU9 778 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 CDC26Q8NHZ8 85 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 FAM76AQ8TAV0 307 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 PIWIL2Q8TC59 973 aaKnown RBP12.39□□□□□ -0.43
GTF3A-209ENST00000640289 THAP4Q8WY91 577 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 ANKRD9Q96BM1 317 aaPredicted RBP12.39□□□□□ -0.43
GTF3A-209ENST00000640289 FCRL1Q96LA6 429 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 PPP3R2Q96LZ3 170 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 CCT7Q99832 543 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 C1orf50Q9BV19 199 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 AKTIPQ9H8T0 292 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 MEAF6Q9HAF1 191 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 RIC8BQ9NVN3 520 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 C5AR2Q9P296 337 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 HEY2Q9UBP5 337 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 FBXL4Q9UKA2 621 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 MMACHCQ9Y4U1 282 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 CHD8Q9HCK8 2581 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 SEC16AO15027 2179 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 IGHV1-45A0A0A0MS14 117 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 GOLGA8QA0A0J9YX86 632 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 A0A1W2PS29 197 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 TCRBV16S1A1N1A0A5B0 115 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 GOLGA8OA6NCC3 632 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 A8MUA0 341 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 TCP11X1B4DZS4 312 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 GOLGA8NF8WBI6 632 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 PEX12O00623 359 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 SDHDO14521 159 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 HDAC3O15379 428 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 MYO1DO94832 1006 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 CYC1P08574 325 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 SDC1P18827 310 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 ALDH9A1P49189 494 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 OR4D2P58180 307 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 FOLH1Q04609 750 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 ZNF763Q0D2J5 394 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 STX4Q12846 297 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 ATP6AP1LQ52LC2 224 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 SFT2D3Q587I9 215 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 RGS9BPQ6ZS82 235 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 GPR155Q7Z3F1 870 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 CPEB2Q7Z5Q1 589 aaKnown RBP12.38□□□□□ -0.43
GTF3A-209ENST00000640289 FNDC5Q8NAU1 212 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 CLHC1Q8NHS4 586 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 DNAJB14Q8TBM8 379 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 NACC2Q96BF6 587 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 METTL2AQ96IZ6 378 aaKnown RBP12.38□□□□□ -0.43
GTF3A-209ENST00000640289 EGLN2Q96KS0 407 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 IP6K3Q96PC2 410 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 WDR77Q9BQA1 342 aaPredicted RBP12.38□□□□□ -0.43
GTF3A-209ENST00000640289 ALOXE3Q9BYJ1 711 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 WDR55Q9H6Y2 383 aaPredicted RBP12.38□□□□□ -0.43
GTF3A-209ENST00000640289 WDR41Q9HAD4 459 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 C19orf25Q9UFG5 118 aaPredicted RBP12.38□□□□□ -0.43
GTF3A-209ENST00000640289 BAIAP2L1Q9UHR4 511 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 PCDHA9Q9Y5H5 950 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 KCNMB2Q9Y691 235 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 ACACAQ13085 2346 aa12.38□□□□□ -0.43
GTF3A-209ENST00000640289 C1orf226A1L170 272 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 BLACEA4D250 179 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 ZNF195O14628 629 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 GUCY1B2O75343 617 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 DNAJB5O75953 348 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 SEC24DO94855 1032 aaPredicted RBP12.37□□□□□ -0.43
GTF3A-209ENST00000640289 PRR35P0CG20 571 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 EPHA3P29320 983 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 TBR1Q16650 682 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 ZNF750Q32MQ0 723 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 SLC9B1Q4ZJI4 515 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 DCAF10Q5QP82 559 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 IL23RQ5VWK5 629 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 OR52E8Q6IFG1 317 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 FAM71E1Q6IPT2 247 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 FAM180BQ6P0A1 224 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 SLC48A1Q6P1K1 146 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 TMEM132CQ8N3T6 1108 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.37□□□□□ -0.431e-8■□□□□ 11.1
GTF3A-209ENST00000640289 TANKQ92844 425 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 EXTL1Q92935 676 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 GFM2Q969S9 779 aaKnown RBP12.37□□□□□ -0.43
GTF3A-209ENST00000640289 TSSK3Q96PN8 268 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 FAIM2Q9BWQ8 316 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 TRIM55Q9BYV6 548 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 ZNF700Q9H0M5 742 aa12.37□□□□□ -0.43
GTF3A-209ENST00000640289 ZNF160Q9HCG1 818 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms